Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0032 ATGAAGGTGAAGAAGGGTTGGCTCGCTGTTCAAGTGGAAGAAGAGACAGAAGAAGCTGGTGGAGTTGGGTCTCAAAGATTTGTGATCCCAATTTCGTATCTTTGTCACCCTCTCTTCAAGCACCTTTTGGATAAGGCTTATGAGGTTTACGGCTACCACACCGAGGGTCCTCTTAAGCTTCCATGTTCAGTTGATGATTTTCTTCATCTCCGATGGAGAATTCAGAAAGAATCCTCTACCCATCATCACCATAACCATAACCATAACCATCACCATCATCGCCAACTTCCTCACGCCTTGTATTTCCATGCTTGTTAA 318 0.4434 MKVKKGWLAVQVEEETEEAGGVGSQRFVIPISYLCHPLFKHLLDKAYEVYGYHTEGPLKLPCSVDDFLHLRWRIQKESSTHHHHNHNHNHHHHRQLPHALYFHAC* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0032 105 Pfam Auxin responsive protein 3 73 IPR003676 GO:0009733
Gso8g0032 105 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 92 IPR003676 GO:0009733
Gso8g0032 105 PANTHER SMALL AUXIN-UP RNA-RELATED 1 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0032 Gso-Chr8 296213 296530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0032 3 98 Calmodulin-binding Proteins AT5G20810 36.458 1.24e-12 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0032 K14488 - gmx:100797889 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1667 5 39956800 39957425 Gso8g0032 8 296213 296530 GST