Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0024 ATGGGGGACGGAAGTGGGAACCGGTGGAGCAGGGCGGAGTGGGTGCAGCAGTACGATCTCTTAGGCAAAATCGGAGAAGGCACTTACGGCCTCGTCTTCCTGGCCCGAACCAAAGGCACTCCCTCCAAATCCATCGCCATCAAAAAGTTCAAGCAATCCAAGGACGGCGACGGCGTCTCCCCCACCGCCATCCGCGAAATCATGCTGCTCAGGGAGATTACGCACGAGAACGTCGTCAAGCTCGTCAATGTCCACATCAACCACGCCGACATGTCGCTCTACCTCGCCTTTGATTACGCCGAGCACGATCTCTATGAAATTATTAGGCATCACAGGGATAAACTCAACCATTCCATTAACCAATACACTGTTAAGTCTTTGCTCTGGCAGTTGCTCAATGGACTAAGCTATCTGCACAGTAATTGGATGATACATCGAGATTTGAAGCCATCGAATATATTGGTTATGGGAGAAGGAGAGGAACATGGAGTTGTTAAGATTGCTGACTTTGGACTTGCGAGGATATATCAAGCTCCTCTGAAGCCGTTATCTGATAATGGGGTTGTTGTAACCATTTGGTATCGTGCACCCGAGTTGCTTCTTGGAGCAAAACATTATACTAGTGCTGTTGATATGTGGGCTGTGGGATGCATTTTTGCTGAGTTGTTGACCTTGAAGCCGCTATTTCAAGGGGCAGAAGTCAAAGCTACATCAAATCCCTTTCAGCTCGACCAACTTGACAAGATATTTAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTTCCTTAGCAAGTCTTCCACATTGGCAACAAGATGTGCAACATATACAAGGACACAAATATGATAATGCTGGTCTCTATAATGTTGTACACCTGTCTCCAAAAAGCCCCGCATATGACCTCTTGTCAAAGATGCTTGAATATGATCCTCGTAAGCGTTTAACAGCAGCACAAGCTTTGGAGCATGAGTATTTCAAAATTGAACCATTACCTGGACGGAATGCACTTGTACCCTGCCAACTTGGAGAGAAAATTGTAAATTATCCCACTCGTCCAGTGGACACCACTACTGATCTTGAAGGAACAACCAATCTGCCACCTTCACAAACGGTAAATGCAGTTTCTGGCAGCATGCCTGGTCCTCATGGGTCAAATAGATCTGTTCCTCGGCCAGTGAATGTTGTTGGAATGCAAAGAATGCCCCCTCAAGCAATGGCAGCTTATAATCTCTCATCTCAGGCAGCCATGGGAGACGGAATGAATCCTGGGGGTATCTCAAAGCAACGAGGTGTTCCACAGGCCCATCAGCCGCAACAGTTGAGAAGGAAGGAGCAAATGGGGATGCCGGGATACCCTGCACAACAGAAGTCAAGACGAATATAA 1386 0.4719 MGDGSGNRWSRAEWVQQYDLLGKIGEGTYGLVFLARTKGTPSKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKLNHSINQYTVKSLLWQLLNGLSYLHSNWMIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATSNPFQLDQLDKIFKVLGHPTLEKWPSLASLPHWQQDVQHIQGHKYDNAGLYNVVHLSPKSPAYDLLSKMLEYDPRKRLTAAQALEHEYFKIEPLPGRNALVPCQLGEKIVNYPTRPVDTTTDLEGTTNLPPSQTVNAVSGSMPGPHGSNRSVPRPVNVVGMQRMPPQAMAAYNLSSQAAMGDGMNPGGISKQRGVPQAHQPQQLRRKEQMGMPGYPAQQKSRRI* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0024 461 ProSitePatterns Protein kinases ATP-binding region signature. 24 49 IPR017441 GO:0005524
Gso8g0024 461 ProSiteProfiles Protein kinase domain profile. 18 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0024 461 SMART serkin_6 18 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0024 461 MobiDBLite consensus disorder prediction 416 461 - -
Gso8g0024 461 Gene3D Transferase(Phosphotransferase) domain 1 99 342 - -
Gso8g0024 461 CDD STKc_CDK8_like 17 326 - -
Gso8g0024 461 Gene3D Phosphorylase Kinase; domain 1 5 98 - -
Gso8g0024 461 Pfam Protein kinase domain 18 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso8g0024 461 PANTHER CYCLIN-DEPENDENT KINASE E-1 9 460 - -
Gso8g0024 461 SUPERFAMILY Protein kinase-like (PK-like) 13 327 IPR011009 -
Gso8g0024 461 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Gso8g0024 461 PANTHER CELL DIVISION PROTEIN KINASE 9 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0024 Gso-Chr8 213966 224716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0024 11 461 Core Cell Cycle Gene Families AT5G63610 76.586 0.0 710
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Gso8g0024 Pkinase 1.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0024 K02208 - gmx:100807993 945.266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1659 5 39860088 39872622 Gso8g0024 8 213966 224716 GST