Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso8g0006 ATGATGCAAGGCTGTGAGGTTGAGGCCATAGGCATAAGCTACACGATCCACACACACAAATCGGAGAACCCTTTTAAAATCTTGAGCAAATCTGCACAAGAACAACTTGACACTGAACAAGATGGTAAAAAAGAAGCAGCAGAAGAGGAAGCACAAGTTGAACAAAGTTGCAGTGGTGGAGTAAGGCATGTTCTGAAGAATGTGAGTTTCCAAGCCAAGCCATGGGAGATCCTAGCAATAGTTGGGCCAAGTGGAGCTGGAAAATCATCGCTGCTTGAGATTCTTGCTGGTAAACACAGCCCTCAAAGTGGAACGGTGTTTCTGAACCACAAGCCTGTAGACAAAGCTCAGTTCAGGAAGCTTTCAGGGTATGTCACACAAAAGGACACTTTGTTTCCTTTACTTACAGTTGAAGAAACCCTCATGTTTAGTGCAAAGCTGAGGCTGAAGCTTTCTCAAGAGCAACTTTGCTCCAGGGTCAAGTCACTGATTAAGGAGCTTGGACTTGACCATGTTGCTGCCACTAGAATTGGTGATGATAGGCTCCGAGGCATATCTGGTGGTGAGAGGCGCAGAGTCTCCATTGGTGTTGAAGTCATTCATGATCCAAAAGTGCTGATTCTTGATGAACCAACCTCAGGGCTTGACAGTACTTCAGCTTTGCAAATAATTGACATGCTTAAGGTCATGGCTGACACAAGAGGGAGAACTATAATCCTCAGTATCCACCAACCCGGGTTCAGAATAGTGAAGCTGTTCAATTCATTGTTGCTGTTGGCCAATGGAAGTGTTTTGCACCATGGAACTGCTGATTTGCTTGGTGTGAATCTAAGGCTGATGGGTTTGGAACTTCCTCTTCATGTCAATGTAGTTGAATTTGCCATTGAGTCCATTGACACCATTCAGCAGCAACAGAAATGTGTGCCTGTTCAGGTAGAAACTCCAAGGCAACTACCAGGGACAATGCAACAACAGAAGAGAGGTGGTGATGGTGAAGCAGGTGAGGGTAGGAATGGTAAGTTCACTTTGCAACAGCTGTTTCAGCAATCCAAGGTAATTGATGAAGAAACCATGTATGCTGGAATGGATTTCACTTGTGAGTTTGCTAATTCTAGATTGAGAGAAACTATGATTCTCAGTCATAGGTTCTCCAAGAACATATTCCGTACAAAAGAGCTATTTACATGCAGGACAGTTCAGATGCTGGTTTCTGGGCTGGTCGTGGGGTCCATCTTTTGTAACCTTAAGGATGATATAGTGGGAGCTTACGAAAGGGTGGGTCTATTTGCTTTCATATTAACGTTTTTGTTGTCAAGCAGCATAGAAGCTCTACCAATTTTCCTGCAAGAAAGGGAGATTCTAATGAAGGAAACATCTTGTGGAAGTTATCGTGTGTCATCCTATGCTATTGCCAATGGCCTAGTTTACTTGCCATTTCTTCTCATCCTAGCCATTTTGTTCTCAATGCCCTTGTACTGGCTTGTAGGGCTCAACCGGAACTTCTTGGCTTTTTTGCACTTTCTGTTGCTGATATGGCTGATTCTTTACACGGCCAATTCAGTTGTGGTGTGTTTCAGTGCTCTGGTGCCTAATTTTATTGTTGGGAACTCAGTGATTGCTGGTGTCATAGGGTCATTCTTCTTGTTCTCTGGATACTTCATATCAAAGCAGGAAATTCCAAAATACTGGATTTTCATGCATTATATATCCTTGTTTAAGTATCCCTTTGAAGGGCTCCTGATCAATGAGTTCTCCAACTCGGGAAAGTGCTTGGAGTACATGTTTGGGGCATGTGTGAAGAGTGGAGAGGATGTGCTTAAAGAAGAAGGGTACGGGGGAGAGAGTAATAGATGGAAGAATGTTGGGGTCACTGTGTGCTTCATCTTGGTTTACAGGTTCATTTCTTATGTTATTCTTAGATACAGATGTTCCCAGATGGGATTTGGCAGGGTTGTCACCAACTAA 1965 0.4346 MMQGCEVEAIGISYTIHTHKSENPFKILSKSAQEQLDTEQDGKKEAAEEEAQVEQSCSGGVRHVLKNVSFQAKPWEILAIVGPSGAGKSSLLEILAGKHSPQSGTVFLNHKPVDKAQFRKLSGYVTQKDTLFPLLTVEETLMFSAKLRLKLSQEQLCSRVKSLIKELGLDHVAATRIGDDRLRGISGGERRRVSIGVEVIHDPKVLILDEPTSGLDSTSALQIIDMLKVMADTRGRTIILSIHQPGFRIVKLFNSLLLLANGSVLHHGTADLLGVNLRLMGLELPLHVNVVEFAIESIDTIQQQQKCVPVQVETPRQLPGTMQQQKRGGDGEAGEGRNGKFTLQQLFQQSKVIDEETMYAGMDFTCEFANSRLRETMILSHRFSKNIFRTKELFTCRTVQMLVSGLVVGSIFCNLKDDIVGAYERVGLFAFILTFLLSSSIEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFSMPLYWLVGLNRNFLAFLHFLLLIWLILYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISKQEIPKYWIFMHYISLFKYPFEGLLINEFSNSGKCLEYMFGACVKSGEDVLKEEGYGGESNRWKNVGVTVCFILVYRFISYVILRYRCSQMGFGRVVTN* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso8g0006 654 MobiDBLite consensus disorder prediction 315 337 - -
Gso8g0006 654 ProSitePatterns ABC transporters family signature. 185 199 IPR017871 GO:0005524
Gso8g0006 654 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 48 286 IPR003439 GO:0005524
Gso8g0006 654 Coils Coil 29 49 - -
Gso8g0006 654 Gene3D - 34 310 IPR027417 -
Gso8g0006 654 Pfam ABC-2 type transporter 376 584 IPR013525 GO:0016020|GO:0140359
Gso8g0006 654 CDD ABCG_EPDR 53 268 - -
Gso8g0006 654 SMART AAA_5 74 263 IPR003593 -
Gso8g0006 654 PANTHER ABC TRANSPORTER G FAMILY MEMBER 5 3 642 - -
Gso8g0006 654 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 272 IPR027417 -
Gso8g0006 654 Pfam ABC transporter 65 213 IPR003439 GO:0005524
Gso8g0006 654 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso8g0006 Gso-Chr8 63559 65973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso8g0006 64 297 Calmodulin-binding Proteins AT2G36910 27.236 4.88e-15 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso8g0006 K05681 - gmx:102665974 1256.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso5g1639 5 39698129 39700461 Gso8g0006 8 63559 65973 GST