Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2316 ATGGCGCCTCTGATCCTGCATGGTGGAAAAACCAACAAAAATTCTTACAAGACACTCATTGCGGCGGAGTATGCCGGCGTCCAAGTTGACTTTGCCCCAAATTTTGAGATGGGTGTCTCCAATAAAACTCCTGAATTTCTCAAGATCAATCCTATTGGCAAGGTTCCTGTGTTGGAAACACCTGATGGTCCAGTATTCGAGAGCAATGCCATTGCTCGCTATGTTACCCAGCTGAAAGGTGATAACACTTTGTATGGATCTTCTTTGATTGAACATGCCCACATTGAACAATGGATTGATTTTTCATCATTGGAGATTGATGCTAATATTATCAAGTGGTATGCCCCAAGAGTTGGACGAGGACCATATCTTCCTCCAGCTGAGGAGGCTGCAATTTCTGCACTAAAGAGAGCTTTGGCTGCTTTGAACACTCACCTTGCTTCCAATACTTACCTGGTTGGGCATTCTGTGACCCTGGCTGACATCATAATGACATGCAATTTATATTTGGGTTTTGCAAACATCCTGGTTAAGTGCTTTACCTCTGAGTTTCCTCATGTTGAGAGATACTTTTGGACCTTGGTCAATCAGCCAAACTTCCGAAAAATAATTGGGCAGGTCAAGCAGGCTGAAACTATTCCTCCTGTTCAATCTGCAAAGAAGCCTTCCCAGCCAAAAGAATCCAAGCCCAAGGTAAAAAATGAACCAAAGAAAGAGGCAAACAAGGAGCCAGAAAAGCCCAAAGAAGAAGCAGAAGAGGAGGCTCCCAAGCCTAAAGCCAAGAATCCCCTTGATCTTCTCCCTCCAAGTCCGATGATACTGGATGAGTGGAAAAGACTCTACTCAAACACTAAAACCAACTTCAGGGAGGTTGCTATCAAAGGATTTTGGGACATGTATGATCCCGAGGGATACTCTCTCTGGTTTTGTGATTACAAATACAATCAGGAGAATACTGTTTCTTTTGTGACATTGAACAAGGTTGGTGGATTTCTTCAGCGGATGGATTTGGCTCGCAAGTATGCATTTGGAAAGATGCTTGTGATTGGATCAGATCCACCATTTAAGGTGAAGGGGCTGTGGCTTTTCCGTGGGCAAGAAATCCCTCAATTTGTGATTGATGAATGCTATGACATGGAGCTCTACGAATGGACTAAGGTTGACATCTCTGACGAACCTCAAAAGGAGCGTGTCAATCAGATGATTGAAGATTGTGAACCTTTTGAGGGCGAGGCTCTTTTGGATGCCAAGTGCTTCAAGTGA 1263 0.4386 MAPLILHGGKTNKNSYKTLIAAEYAGVQVDFAPNFEMGVSNKTPEFLKINPIGKVPVLETPDGPVFESNAIARYVTQLKGDNTLYGSSLIEHAHIEQWIDFSSLEIDANIIKWYAPRVGRGPYLPPAEEAAISALKRALAALNTHLASNTYLVGHSVTLADIIMTCNLYLGFANILVKCFTSEFPHVERYFWTLVNQPNFRKIIGQVKQAETIPPVQSAKKPSQPKESKPKVKNEPKKEANKEPEKPKEEAEEEAPKPKAKNPLDLLPPSPMILDEWKRLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNQENTVSFVTLNKVGGFLQRMDLARKYAFGKMLVIGSDPPFKVKGLWLFRGQEIPQFVIDECYDMELYEWTKVDISDEPQKERVNQMIEDCEPFEGEALLDAKCFK* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2316 420 PANTHER - 4 420 - -
Gso7g2316 420 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 260 420 IPR001662 GO:0003746|GO:0006414
Gso7g2316 420 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Gso7g2316 420 SMART EF1G_2 259 367 IPR001662 GO:0003746|GO:0006414
Gso7g2316 420 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Gso7g2316 420 SUPERFAMILY eEF1-gamma domain 261 420 IPR036433 GO:0003746|GO:0006414
Gso7g2316 420 MobiDBLite consensus disorder prediction 214 267 - -
Gso7g2316 420 CDD GST_N_EF1Bgamma 6 78 - -
Gso7g2316 420 SFLD Main (cytGST) 6 191 - -
Gso7g2316 420 SUPERFAMILY Thioredoxin-like 1 86 IPR036249 -
Gso7g2316 420 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 4 420 IPR044628 GO:0004364
Gso7g2316 420 CDD GST_C_EF1Bgamma_like 91 212 - -
Gso7g2316 420 Gene3D Glutaredoxin 1 75 - -
Gso7g2316 420 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Gso7g2316 420 Gene3D - 81 216 - -
Gso7g2316 420 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 260 420 IPR036433 GO:0003746|GO:0006414
Gso7g2316 420 Pfam Glutathione S-transferase, C-terminal domain 130 198 IPR004046 -
Gso7g2316 420 MobiDBLite consensus disorder prediction 224 260 - -
Gso7g2316 420 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Gso7g2316 420 SFLD Glutathione Transferase (cytosolic) 6 191 IPR040079 -
Gso7g2316 420 Pfam Elongation factor 1 gamma, conserved domain 259 367 IPR001662 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2316 Gso-Chr7 46743995 46746705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2316 4 420 Eukaryotic Initiation Factors Gene Family AT1G57720 71.462 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2316 K03233 - gmx:100810452 788.489