Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2304 ATGGAACTTTCGAGTCAAGAAGGCGAAATCCCAATCCCAATAAACAGCAGTACTACATATGGACATGGTAATGGTCATGGTCACGGACTCATGATTCACCATGACCATAACCACATTATATCCTCCACGGCACCTTCAAATGGCATACCTACCATGCAGCAGGAGGAGGATCATGGACTTGGAAGCTACAAGAAAGTAGTTCGGTACAGAGAATGCCTGAAGAACCATGCAGCAGCCATGGGAGGGAATGCCACTGATGGGTGTGGTGAGTTCATGCCAAGTGGAGAAGAAGGGACCATAGAGGCACTGAACTGCTCTGCCTGTCATTGCCACAGAAACTTCCACAGAAAGGAAGTGGAGGGTGAGCCTTCATGTGACTACCACCACCTCAACATCAACAGAAGAAGACACATTCTAGGCCCTCACAAGAACCTCCTCCCACCTGAGGCTCTGGGATACCCTACAGCTGCTAGAAGTGTCCCACCACACCAGATGATAATGCCCTACAACATTGGAGGAATTGGGCACCACCTCCCTTCAGAATCTGATGAACAAGAAGATGGTGGTGGTGGTGGTGGAATGGTGCAGCTTAGTAGTAGACCCATCAGCTCCCAGCAGCAGCTAGTGAAGAAAAGGTTCAGGACAAAGTTCAGCCAGGAGCAGAAGGACAAAATGCTCAACTTTGCTGAGAAGGTGGGTTGGAAAATCCAGAAGCAAGAGGAGTCTGTTGTGCAACAGTTCTGCCAAGAGATTGGGGTCAAGAGAAGAGTGCTCAAGGTTTGGATGCATAACAATAAGCACAATCTCGCCAAAAAGAATCCCCCAACAACTGCTGCACCACCACCACCTTAA 852 0.4894 MELSSQEGEIPIPINSSTTYGHGNGHGHGLMIHHDHNHIISSTAPSNGIPTMQQEEDHGLGSYKKVVRYRECLKNHAAAMGGNATDGCGEFMPSGEEGTIEALNCSACHCHRNFHRKEVEGEPSCDYHHLNINRRRHILGPHKNLLPPEALGYPTAARSVPPHQMIMPYNIGGIGHHLPSESDEQEDGGGGGGMVQLSSRPISSQQQLVKKRFRTKFSQEQKDKMLNFAEKVGWKIQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKKNPPTTAAPPPP* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2304 283 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 210 266 IPR006455 -
Gso7g2304 283 MobiDBLite consensus disorder prediction 176 208 - -
Gso7g2304 283 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 69 118 IPR006456 -
Gso7g2304 283 SUPERFAMILY Homeodomain-like 206 271 IPR009057 -
Gso7g2304 283 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 4 272 - -
Gso7g2304 283 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 4 4 272 - -
Gso7g2304 283 Pfam ZF-HD protein dimerisation region 67 119 IPR006456 -
Gso7g2304 283 Gene3D - 198 272 - -
Gso7g2304 283 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 68 119 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2304 Gso-Chr7 46636234 46638544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2304 1 272 ZF-HD Transcription Factor Family AT2G02540 48.000 4.11e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Gso7g2304 ZF-HD_dimer 1.5e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2304 - - gmx:100805652 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2304 7 46636234 46638544 Gso17g0016 17 246948 249128 GST