Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2292 ATGATGGAGGAGGATGGGACCAGCAAAGAGCAGCAGCAGGCGGCGGGAGTGGGAATTCTTCTTCAGATAATGATGTTAGTTTTGTCATTCGTCTTAGGTCACGTCCTTCGTCGCAAGAAGATTTACGTTCTTCCCGAAGCCAGCGCTTCTCTTCTCATTGGCTTACTCGTTGGTACTCTCGCTAACATTTCTCACACTCAAACCAGCATCAGGGCGTGGTTCAATTTTCACGAGGAGTTCTTCTTCCTCTTCCTTTTGCCTCCTATCATATTTCAGTCTGGCTTCAGTCTCTCTCCCAAGCCTTTCTTCGCTAATTTCGGAGCCATTGTTACATTTGCTATATTCGGCACCTTTCTGGCTTCCATTGTCACCGGTGTCTTGGTTTATCTTGGTGGGTTGATGTACCTCATGTACAGACTGCCTTTTGTCGAGTGCCTAATGTTTGGTGCACTTATATCCGCCACGGACCCTGTTACTGTTTTGTCCATTTTTCAGGAGCTTGGCACAGATGTCAATCTATATGCCTTGGTTTTTGGAGAATCTGTTTTGAATGATGCAATGGCTATTTCTCTGTACAGGACAATGTCAGTAGTTAAAAGTCATCCATCTGGACAAAATTTCTTCATGGTGATTGTTAGATTTTTGGAGACTTTTGTTGGCTCAATGTCTTCTGGTGTTGGAGTTGGATTTATATCTGCTTTACTATTTAAGTATGCAGGGTTGGATATTGACAATCTTCAGAACTTGGAGAGCTGTCTTTTTGTTCTTTTCCCATACTTCTCGTACATGCTTGCAGAAGGTCTTGGACTGTCTGGTATTGTGTCAATATTGTTCACAGGAATGGTCATGAAGCATTACACATATTCAAATTTGTCACGTAGTTCTCAAAGATTTGTCTCTGCTTTTTTTGAGTTGATATCATCATTAGCAGAGACATTTGTATTTATCTACATGGGCTTTGATATTGCTATGGAGAAACATAGCTGGTCACATGTTGGATTTATATTCTTCTCCATTATATTCATTGGAATTGCAAGGGCAGCCAATGTGTTCTCTTGTGCTTATCTAGTCAACTTGATCAGACCTGCCTATCGACAAATACCGCCAAAACACCAGAAAGCACTTTGGTATAGTGGACTTCGAGGGGCAATGGCCTTTGCCCTTGCTCTGCAATCAATTCATGATCTGCCAGAAGGACATGGACAGACCATCTTAACTGCAACTACAGCAATAGTTGTTTTGACGGTATTACTGATTGGCGGTTCAACGGGCACCATGCTGGAAGCTTTAGAAGTTGTAGGTAGTGACAGTCCTGTCGAGAGTCCTTTGGCTTCGAATTTTGAGGGAAACAATGTGTATATTTCTCCTGATGATGAAGAACCGTCATCAGGGAACAAAATCAAGATGAAGCTACAAGAATTCCAAAGGAGTGCTGCATCTTTTACAGCAATAGATAAAAACTACCTCACCCCATTCTTCACTAGTCAAAATGGAGATGAAGAAGATGAAGCTGTGCCTTTGACTTTGAAGAACGTGGGATTGGATGACCACGACCACTATTCGTCATGA 1569 0.4226 MMEEDGTSKEQQQAAGVGILLQIMMLVLSFVLGHVLRRKKIYVLPEASASLLIGLLVGTLANISHTQTSIRAWFNFHEEFFFLFLLPPIIFQSGFSLSPKPFFANFGAIVTFAIFGTFLASIVTGVLVYLGGLMYLMYRLPFVECLMFGALISATDPVTVLSIFQELGTDVNLYALVFGESVLNDAMAISLYRTMSVVKSHPSGQNFFMVIVRFLETFVGSMSSGVGVGFISALLFKYAGLDIDNLQNLESCLFVLFPYFSYMLAEGLGLSGIVSILFTGMVMKHYTYSNLSRSSQRFVSAFFELISSLAETFVFIYMGFDIAMEKHSWSHVGFIFFSIIFIGIARAANVFSCAYLVNLIRPAYRQIPPKHQKALWYSGLRGAMAFALALQSIHDLPEGHGQTILTATTAIVVLTVLLIGGSTGTMLEALEVVGSDSPVESPLASNFEGNNVYISPDDEEPSSGNKIKMKLQEFQRSAASFTAIDKNYLTPFFTSQNGDEEDEAVPLTLKNVGLDDHDHYSS* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2292 522 PANTHER SODIUM/HYDROGEN EXCHANGER 6 6 503 - -
Gso7g2292 522 PRINTS Na+/H+ exchanger signature 80 91 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso7g2292 522 PRINTS Na+/H+ exchanger signature 94 108 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso7g2292 522 PRINTS Na+/H+ exchanger signature 109 117 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso7g2292 522 PRINTS Na+/H+ exchanger signature 149 159 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Gso7g2292 522 Pfam Sodium/hydrogen exchanger family 25 428 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Gso7g2292 522 Gene3D - 142 194 - -
Gso7g2292 522 PANTHER SODIUM/HYDROGEN EXCHANGER 6 503 IPR018422 GO:0006812|GO:0015299|GO:0016021
Gso7g2292 522 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 22 437 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2292 Gso-Chr7 46506475 46512834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2292 12 430 Antiporters AT3G05030 33.560 3.36e-52 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2292 K14724 - gmx:100810105 943.725