Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2285 ATGGCAGACGTTGAGGTTGATGTGGCGGCGGCGGCGGCGGCGGCGGCAGGGCAGCCAAAGAAGAGAACGTTCAAGAAGTTCAGCTTCAGGGGGGTGGATCTGGACGCGCTTCTGGACATGTCCACTGACGAACTCGTGAAGATGTTCAGTGCACGCGCACGCAGAAGGTTCCAGAGAGGTCTCACCAGAAAGCCCATGGCCTTGATTAAAAAGCTCCGCAAAGCGAAAAGGGAAGCACCAGCAGGTGAGAAGCCAGAACCAGTTCGCACCCATCTCCGCAACATGATTATTGTGCCTGAGATGATTGGTAGCATCATTGGAGTCTACAATGGCAAGACCTTCAACCAGGTTGAAATCAAACCCGAGATGATTGGACATTATCTCGCTGAGTTCTCTATTTCATACAAACCCGTCAAGCACGGTAGGCCTGGTATTGGTGCCACTCACTCTTCAAGGTTCATTCCTCTCAAGTGA 474 0.5232 MADVEVDVAAAAAAAAGQPKKRTFKKFSFRGVDLDALLDMSTDELVKMFSARARRRFQRGLTRKPMALIKKLRKAKREAPAGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2285 157 Hamap 30S ribosomal protein S19 [rpsS]. 53 146 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gso7g2285 157 ProSitePatterns Ribosomal protein S19 signature. 110 134 IPR020934 GO:0003723
Gso7g2285 157 PANTHER BNAA03G55820D PROTEIN 7 157 - -
Gso7g2285 157 PRINTS Ribosomal protein S19 family signature 90 109 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gso7g2285 157 PRINTS Ribosomal protein S19 family signature 110 122 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gso7g2285 157 PRINTS Ribosomal protein S19 family signature 122 137 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gso7g2285 157 Pfam Ribosomal protein S19 55 140 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gso7g2285 157 Gene3D 30s Ribosomal Protein S19; Chain A 14 157 IPR023575 GO:0003735|GO:0005840|GO:0006412
Gso7g2285 157 SUPERFAMILY Ribosomal protein S19 60 141 IPR023575 GO:0003735|GO:0005840|GO:0006412
Gso7g2285 157 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 7 157 IPR002222 GO:0003735|GO:0005840|GO:0006412
Gso7g2285 157 TIGRFAM uS19_arch: ribosomal protein uS19 24 157 IPR005713 GO:0003735|GO:0006412|GO:0015935
Gso7g2285 157 PIRSF RPS19p_RPS19a_RPS15e_RPS19o 12 157 IPR002222 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2285 Gso-Chr7 46444681 46445703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2285 1 157 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 85.987 4.41e-94 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2285 K02958 - gmx:100801408 289.656