Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2278 ATGCCATCAACAAGGTCATGGGAAATGGAGCACGATGAGTGCATCAGTTGTGGCGGTTTTATTGGGTTCAAGAGAAACCAAGTGATAGATTGCAGCAGCGAGATAGGAGATTCTGATACAGAGGAGTTGTTTGAGATAAATCTGAAGGAGAAGGAGCCTTTGGCTTTGGATGCAATAAGAGAAGACTGCGAGATCAGCACTGTGTTCTCGCTTGATATTGATATTCACGACGGCGGTAGCGGCAACGATGATGATGTTGTTTATGTGGCAGTAGGCAAGGATGGAGATTCGAGCATGGAAGCTCTTTCATGGGCATTGAAGCACGCCGTGACACCCTCTGCCACCGTTTGTATCGTACACGTTTTCCCTCAAGTCAAGCTCATTCCAAGTCCATTGGGGAAAATTCCAAGGAGCCACGTAAATCTAGAGTATGTTAACATGCATTTGACACAGGAGAAAGGCAAGAGAAAATTGCTCCTTCAAAAGTTCATTGACCTCTGCGTTGATTCGAAGGTTAAGGTGGAGATGAAGCTTATCGAGGGTGACAATGTTGCTAAAACCATCGTGGACCTTGTCGGAAATCTTAATATAAGGAAATTGGTGATTGGAATTACCAAATCTAATTTAAGAAAATCTGGGTCTAGAAGTCATAATTCCATAGCGGCCAAGGTATTGAAAAATGCACAGGAGAGCTGTGACATAAAAATCATCTGCGAAGGAAGAGAAGTGATCGACCAGATGAGTGATTGCACTTCACCACGCTCCATAGACGTCAAAGGGAGTTTGAGACTTTCACAGGAAAAAAATGAATCCCGTGGATTTGTCCCACTTAAGCATTTTATGCCCAGTTCGTTATGGTTATTTAGGTCCATCACCAAGATGAGATGA 888 0.4347 MPSTRSWEMEHDECISCGGFIGFKRNQVIDCSSEIGDSDTEELFEINLKEKEPLALDAIREDCEISTVFSLDIDIHDGGSGNDDDVVYVAVGKDGDSSMEALSWALKHAVTPSATVCIVHVFPQVKLIPSPLGKIPRSHVNLEYVNMHLTQEKGKRKLLLQKFIDLCVDSKVKVEMKLIEGDNVAKTIVDLVGNLNIRKLVIGITKSNLRKSGSRSHNSIAAKVLKNAQESCDIKIICEGREVIDQMSDCTSPRSIDVKGSLRLSQEKNESRGFVPLKHFMPSSLWLFRSITKMR* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2278 295 CDD STK_N 86 240 - -
Gso7g2278 295 PANTHER AMINOACYLTRANSFERASE, E1 UBIQUITIN-ACTIVATING ENZYME-RELATED 1 289 - -
Gso7g2278 295 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 52-LIKE 1 289 - -
Gso7g2278 295 Pfam Universal stress protein family 89 228 IPR006016 -
Gso7g2278 295 Gene3D HUPs 85 237 IPR014729 -
Gso7g2278 295 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 92 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2278 Gso-Chr7 46392748 46398686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2278 77 243 U-box Gene Family AT5G65500 31.579 4.15e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2278 - - gmx:100799795 588.571