Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2260 ATGCAAACGTCTCAGAAACACCCAAGTTCAGCTGGTGTCCATTTCTATCACCAGCCTGTGCAAGGCATTTACCAAATGTTGCAAAGCAATCTATGCCATGATAGCAGCAGCCAGGGAACAAGTGTTTCTTTTGAAACCTGCAAGGAGCAATACTTTACTCTAGAATCATGCCCAGCACCCACTACTTGTTTCGTGGATTGTGATGATTCTCCTTCCTATGCCAGTGTATCATCTAAAAGGACTCCATTTTCTCCACAGGGTTCTCAGTCATGCTATTCAGATCACCAGCAGTCCTCTGACAACACCTACGGTTCGCCAATAAGCGGCTTGTCCAGTGTTGATGACGGGCATGAACTGAAGCACAAGCTTAGAGAACTGGAGATTTCATTGTTGGGGCCTGAACAATCAGACAGTTGCGGCTGCTGCGTCGTCAAGGGTGGCCTCCAGGGATCATCTCAGTTGGCTAAACATAACTGGGATCAGATTGCAGAGAACGTTGCACAATTTGACTTGAAAGGAGTCCTCAGGGTATGTGCACAGGCTGTGTCTGATGATGATGTTCCAACAGCAAGAGGCTGGATGGATAATGTATTGGGGAAAATGGTATCAGTCTCTGGTGATCCAATCCAGAGGCTGGGTGCTTACTTATTGGAGGGGCTTAGAGCAAGGTTGGAATCATCAGGGAATCTCATCTACAAATCCTTGAATTGTGAACAACCAACAAGCAAAGAACTAATGAGTTACATGCACATTTTGTACCAGATTTGCCCGTACTGGAAGTTTGCATACATATCTGCAAATGCTGTCATTGAAGAAGCAATGGCAAATGAGTCCAGGATTCACATAATTGATTTCCAAATTGCGCAGGGCACGCAGTGGCATTTACTTATCCAGGCTCTTGCACATAGGCCTGGGGGACCCCCCTCCCTTCGTGTGACAGGTGTTGATGATTCGCAGTCGATTCATGCACGTGGTGGAGGACTTCAGATTGTAGGAGAAAGGCTTTCAGATTTTGCCAGGTCTTGTGGAGTTCCATTTGAATTCCGCAGTGCTGCAATATCTGGCTGTGAGGTTGTACGAGGAAATATTGAAGTTCTACCCGGAGAAGCTCTGGCTGTAAGTTTTCCCTATGTTTTGCACCACATGCCTGATGAGAGTGTGAGCACTGAGAATCACAGAGATAGATTGCTGAGGTTGGTTAAGAGGTTGTCTCCCAAGGTTGTTACCATTGTTGAGCAAGAATCCAACACCAACACGTCCCCATTCTTTCACAGGTTTGTTGAGACCCTGGATTATTATACTGCAATGTTTGAATCTATAGATGTGGCTTGCCCCAGAGATGACAAGAAGCGGATTAGCGCAGAGCAGCATTGCGTGGCACGAGACATCGTCAACATGATAGCTTGTGAGGGGGTTGAGAGGGTGGAGAGGCATGAACTTTTGGGAAAGTGGAGGTCAAGACTTTCCATGGCTGGATTTAAACAGTGTCAATTGAGTTCTTCAGTGATGGTTGCTATACAAAATCTCCTAAAGGAGTTCAGTCAAAATTATAGGCTTGAACATAGAGATGGTGCTCTTTATCTTGGTTGGATGAACAGACATATGGCCACCTCTTCTGCTTGGAGGTGA 1629 0.4598 MQTSQKHPSSAGVHFYHQPVQGIYQMLQSNLCHDSSSQGTSVSFETCKEQYFTLESCPAPTTCFVDCDDSPSYASVSSKRTPFSPQGSQSCYSDHQQSSDNTYGSPISGLSSVDDGHELKHKLRELEISLLGPEQSDSCGCCVVKGGLQGSSQLAKHNWDQIAENVAQFDLKGVLRVCAQAVSDDDVPTARGWMDNVLGKMVSVSGDPIQRLGAYLLEGLRARLESSGNLIYKSLNCEQPTSKELMSYMHILYQICPYWKFAYISANAVIEEAMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPSLRVTGVDDSQSIHARGGGLQIVGERLSDFARSCGVPFEFRSAAISGCEVVRGNIEVLPGEALAVSFPYVLHHMPDESVSTENHRDRLLRLVKRLSPKVVTIVEQESNTNTSPFFHRFVETLDYYTAMFESIDVACPRDDKKRISAEQHCVARDIVNMIACEGVERVERHELLGKWRSRLSMAGFKQCQLSSSVMVAIQNLLKEFSQNYRLEHRDGALYLGWMNRHMATSSAWR* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2260 542 Pfam GRAS domain family 174 542 IPR005202 -
Gso7g2260 542 MobiDBLite consensus disorder prediction 76 110 - -
Gso7g2260 542 ProSiteProfiles GRAS family profile. 162 542 IPR005202 -
Gso7g2260 542 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 541 IPR005202 -
Gso7g2260 542 MobiDBLite consensus disorder prediction 76 109 - -
Gso7g2260 542 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 15 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2260 Gso-Chr7 46211847 46215447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2260 1 542 GRAS Transcription Factor Family AT4G17230 59.450 0.0 620
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso7g2260 GRAS 2.4e-123 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2260 - - gmx:100792931 1105.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2260 7 46211847 46215447 Gso17g0060 17 638286 641657 GST
Gso7g2260 7 46211847 46215447 Gso15g0979 15 9113490 9117433 PCT
Gso7g2260 7 46211847 46215447 Gso9g0097 9 871656 875485 PCT