Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2243 ATGAAGCTTGACTGCTCTAACGGCCAGGCTCCTCTCGCCGCCGATGTTTCTCCGCCGCAGGAAGACGGCTCCGAGGAGGAGATATTCGTGCCGCCGCTCAACTTCGCCATGGTCGACAACGGCATTTTTAGGGCTGGCTTTCCCGATTCCGCCAACTTCGGATTCCTGAAATCACTCCGTCTCCGTTCCGTAATGTGTTTGTGCCCTGAACCGTATCCCGAAACGACTTCGGAATTTTTGAAGGCCAACGGAATAAGGCTTTATCAGTTCGGGATCGATGGCTGTAAGGAACCCTTTGTCAACATCCCAAATGATACAATTCGTGAAGCTTTGAAAGTAGCCCTCGATGTTAGGAATCACCCCCTGCTGATTCATTGTAAACGAGGGAAGCATCGCACTGGTTGTCTTGTGGGATGCATAAGAAGATTGCAGAGGTGGTGTCTATCATCTGTTTTTGATGAGTACCAAAGGTTTGCAGGTGCCAAAGCTAGAGTGTCAGACCAGAGGTTCATCGAATTGTTTGATATCTCTTGTTTGAAGCACCACCCACTGTCATTTTCATGCTCCAAAAAATAG 576 0.4878 MKLDCSNGQAPLAADVSPPQEDGSEEEIFVPPLNFAMVDNGIFRAGFPDSANFGFLKSLRLRSVMCLCPEPYPETTSEFLKANGIRLYQFGIDGCKEPFVNIPNDTIREALKVALDVRNHPLLIHCKRGKHRTGCLVGCIRRLQRWCLSSVFDEYQRFAGAKARVSDQRFIELFDISCLKHHPLSFSCSKK* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2243 191 PRINTS Plant and fungal dual specificity phosphatase signature 29 46 IPR020428 GO:0016791
Gso7g2243 191 PRINTS Plant and fungal dual specificity phosphatase signature 66 79 IPR020428 GO:0016791
Gso7g2243 191 PRINTS Plant and fungal dual specificity phosphatase signature 85 99 IPR020428 GO:0016791
Gso7g2243 191 PRINTS Plant and fungal dual specificity phosphatase signature 102 116 IPR020428 GO:0016791
Gso7g2243 191 MobiDBLite consensus disorder prediction 1 25 - -
Gso7g2243 191 ProSitePatterns Tyrosine specific protein phosphatases active site. 124 134 IPR016130 GO:0016311|GO:0016791
Gso7g2243 191 ProSiteProfiles Dual specificity protein phosphatase domain profile. 34 186 IPR020422 GO:0006470|GO:0008138
Gso7g2243 191 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 29 176 IPR029021 -
Gso7g2243 191 CDD PFA-DSP_Siw14 29 175 - -
Gso7g2243 191 Gene3D Protein tyrosine phosphatase superfamily 28 178 IPR029021 -
Gso7g2243 191 PANTHER - 16 190 - -
Gso7g2243 191 Pfam Tyrosine phosphatase family 30 183 IPR004861 -
Gso7g2243 191 PANTHER TYROSINE-PROTEIN PHOSPHATASE 16 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2243 Gso-Chr7 46059790 46063809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2243 13 191 Protein tyrosine phosphatase (PTP) family AT4G03960 70.270 2.59e-97 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2243 K18045 - gmx:100785520 400.593