Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2240 ATGAGTCAACTGGGTCTGATATTGCAGGAATCGCTCCGCACCGAGAGAGAAACAAGAACCATTCTGGGTTTGCTAACGGAGCAAATGGACGGCGTCGATAGAGCCCAACGGAGGAGACGGACCCTCAAAGAACGCCTCAGATTCACCGGAATCGGCTGTTGTGGAGCCACGTGGGTTTTCCGTCCAATTGTCAGGGAGGAAGGAGGAGGGGCACAAGCACATCAACAGCAAACAAATGCGGCTCAAGATCCGAATCCTAATGGATCCGAATACGTGAGCCCGAGCCCGTCGGGTACGAGTATGAATCTTGCGGCGGCGCTGGCAGCGGAGCGGCAGCTCCGGGATGGGGAGGGGGAGGGGAGGAGGGTGGTGGCGCCGGGGACGCCGTTGAGGGTGTCGTTGATGCGGCTGTTGGAGGAAACAGAGGGCGGGGATGCGGAGAAAGGAGGGGGTGGTGTGGGGAATGATTGGGTGTGCTGCGTGTGCATGGGAAGGAAGAAAGGCGCGGCATTCATCCCGTGTGGGCACACCTTCTGTAGGGTGTGTTCGAGGGAGCTGTGGTTGAACAGAGGTACTTGTCCCCTTTGCAACCGTTCAATACTCGAGATTCTCGACATCTTCTGA 624 0.5785 MSQLGLILQESLRTERETRTILGLLTEQMDGVDRAQRRRRTLKERLRFTGIGCCGATWVFRPIVREEGGGAQAHQQQTNAAQDPNPNGSEYVSPSPSGTSMNLAAALAAERQLRDGEGEGRRVVAPGTPLRVSLMRLLEETEGGDAEKGGGGVGNDWVCCVCMGRKKGAAFIPCGHTFCRVCSRELWLNRGTCPLCNRSILEILDIF* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2240 207 MobiDBLite consensus disorder prediction 69 98 - -
Gso7g2240 207 Pfam Zinc finger, C3HC4 type (RING finger) 158 201 - -
Gso7g2240 207 CDD RING-HC 159 196 - -
Gso7g2240 207 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 17 207 - -
Gso7g2240 207 SUPERFAMILY RING/U-box 155 204 - -
Gso7g2240 207 SMART ring_2 159 196 IPR001841 -
Gso7g2240 207 ProSiteProfiles Zinc finger RING-type profile. 159 197 IPR001841 -
Gso7g2240 207 PANTHER OS01G0917900 PROTEIN 17 207 - -
Gso7g2240 207 MobiDBLite consensus disorder prediction 71 98 - -
Gso7g2240 207 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 206 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2240 Gso-Chr7 46035888 46037085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2240 21 207 C3H Transcription Factor Family AT4G22250 56.061 1.18e-59 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2240 - - gmx:106799504 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2240 7 46035888 46037085 Gso17g0081 17 786404 787532 GST
Gso7g2240 7 46035888 46037085 Gso15g0948 15 8835833 8836777 PCT
Gso7g2240 7 46035888 46037085 Gso9g0065 9 607224 608453 PCT