Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2239 ATGAACAACTCAAAGCAACAGAAGCAGCAGCATCAGCTTCAACAAAGAGGATGCAAGGCTTTGTGTTGCAGTTGCAGGTTCAGTGTTTCTTCCTCTGAGGAAGCAGAAAGCTCATCAGCCTCTGACAGGTTCCCTTCTGTTTCAAGCCTTGCACATGCCATGGTGCAAGAGAGACTTGACCAAATGATTAGAGCTAGGCATGTAGAGAGAAGAAGGCAGCAGAGCAGAGAAGGGACCAAGTTTGTTGTAATGGTAGCAATGGAGAAGAGCTCTTATGATCCAAGAGAGGATTTTAGGGAGTCCATGATGGAGATGATTACTGCAAACCGCCTTCAAGACGCCAAAGATCTTCGTAGTCTATTGAACTATTATATCTCAATGAACTCTGATGAGTACCATAGTCTTATCCTTGAGGTTTTTCATGAGGTTTGTACTAGTTTGTTCTTATCATGTAAATGTCATAATTGGTAA 471 0.4246 MNNSKQQKQQHQLQQRGCKALCCSCRFSVSSSEEAESSSASDRFPSVSSLAHAMVQERLDQMIRARHVERRRQQSREGTKFVVMVAMEKSSYDPREDFRESMMEMITANRLQDAKDLRSLLNYYISMNSDEYHSLILEVFHEVCTSLFLSCKCHNW* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2239 156 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 13 149 IPR038933 GO:0045892
Gso7g2239 156 PANTHER TRANSCRIPTION REPRESSOR-RELATED 13 149 - -
Gso7g2239 156 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 85 148 IPR006458 -
Gso7g2239 156 Pfam Transcriptional repressor, ovate 91 148 IPR006458 -
Gso7g2239 156 ProSiteProfiles OVATE domain profile. 87 146 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2239 Gso-Chr7 46027131 46027924 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Gso7g2239 Ovate 1.1e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2239 - - gmx:102663136 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2239 7 46027131 46027924 Gso17g0082 17 794251 795038 GST