Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2232 ATGGAGGTTGCAGTCCCCAGACAACAACAGCCAAAAAATCAGCACAATGAGGATAAGATAGAGTTCTCAAGATACTCAAAACATTCCAGAACTGTTCAGAGGAAAGCTGACAAAATCCCTGAGTATGGTCACAATAAACAAGAACTAAAAGGGGAAGAAACTATGAGATGTTTAAAGAAAAATAACGCTGTAGGATTGGAGACTACAATTACACAAGGAGAACAAGTAAATCAGCCTACTAAGGACAAAATCCTAAAAAGCTCGAAAAGTCTTGGAACTACAAAGACGAGAAAGGTTGAAGAAATTTATAAGTGTGATGATACAAAACTGAAGTTATGCAAGAAAGGACATGAGACACAGAAGCTTACTGTCTCAAACAAGAAAAGGAAATTTGAAGGTGATCTCTTGAATGACGATTTTGAAGATGTTTTAAAGTCAAGGACCAGGAGAAGAAGAATGAATGATGTGATGGATGTTGGACAAAATCCCCGAAAATGTCATCAGTGCATGAAAAAGAAGAGAACATTTTGTGTGTCTTGTACTAAATGCCCAAAAATGTACTGTATGCGATGTGTCAATAAATGGTACCCTGATATGTCAGTAGAAGAAATTGCTTCAAGTTGTCCATTTTGCCGGAAAAATTGCAATTGCAATGTTTGCTTGTGTTCAAGAGGGATGATTAAGACATCTAACAGGGACATCAGTGATTATGAAAAAGCTCAGTATCTGCAATATATGATTAACTTACTCCTACCATTTTTGAAACAAATTTGTCATGAACAAAGTCAAGAGGATCAGATTGAAGCTAAATTACTAGGAAAATCTTCTTTTGAGATTGAGATACCCCAAAGTCTTTGTGGTGATGTTGAACGTGTCTATTGTGACCATTGTGCTACTTCAATTATTGACTTTCATAGAAGCTGCCCCTATTGTTCCTATGAACTCTGCCTTAGTTGTTGCCAAGAAATACGTGATGGAAGCATTACACCCCGGGCTGAGCTGAAGTTCCCATATGTAAATAGGGGCTATGATTATATGCATGGTGGGGACCCTCTACCTGTGCCTTGTGATTTAGAGACATTAGAAGGTCATATTGAGCCGTCTACTGTGTGGAATGCTAAGAGTGATGGAAGCATTAGTTGTGCGCCAAAGGAGTTGGGGGGTTGCGGTAGTGCTGTATTGGAGCTGAGACGCATCCTCCCAGATGGGTGGATATCTGACTTGGAAGCCAAAGCTCGCAATATGCTGAAAATTTGGGAAATTGAGCACACAACTCTTCAGCAAAAAGAAGCAGTATCAAGCTTCACCTTTTTGAGAAAGGAAGCTATTAGAGAAGGCATAAATGACAATAACATATACTATCCAGAGTCAAGTAACACTCAAAAAGAAGGGCTGCTGCTTTTCCAAAAGCATTGGGCTAATGGTGAACCAATTATAGTCCGTGATGTCCTTAAACAGGGAACAGGTCTGAGCTGGGAGCCAATGGTAATGTGGCGAGCATTATGTGAAAATATGGTTTCAGAAATCAGTTCAAAAATGTCAGAAGTGAAAGCCATCGATTGCCTAGCTAATTGTGAGGTAGAAATTGATACTCACACGTTCTTTAAAGGTTATATAGAGGGAAGAACATACAGAGATCTCTGGCCAGAGATGCTCAAGCTAAAAGACTGGCCCCCCTCCGATAAGTTTGAAGATCTTTTGCCCCGCCATTGTGATGAGTTTATTCGCTCCTTGCCATTTCAAGAGTACAGCGATCCTCGGGCTGGAATTCTCAATCTTGCTGTGAAGTTGCCAGCGCATGTCCTAAAACCTGACATGGGTCCAAAAACATATATTGCGTATGGGATTAAAGAAGAGCTTGGTAGAGGTGACTCTGTAACAAAGCTTCACTGTGATATGTCAGATGCGGTGAATATTTTGGCCCATACAGCTGAGGTGATATTAACTGATGAACAACACTTTATTATATCAAAGTTGAAAGAAGCACACAAGGCACAAGATGAGAGAGAACAGTGTGCCGAAGAGAGGGTTGCTGACAGCCTGGATGATCAACCTTGCAAAGACAACAAAGAACATATAGAAAATAAGGAAGTTTTTGAAGCCAAAAGCATGAAGAAACAACCTATTGAAATCAATGAAAATATCTTTCCAAATAATGTTCTTGAGGGGTTCACTTCTCCTGCTATAGAGAATGAATCAATGGAAACTGGTAGTGCCCTCTGGGATATCTTTCGGAGAGAGGATTCTGAAAAGTTAGAAACATATCTTAGAAAACACTCCAAAGAATTTAGGCATACTTACTGTTCTCCAGTTGAACAGGTCGTACATCCAATTCATGACCAATGTTTTTATTTGACATTGGAGCATAAGAAGAAGCTGAAGGAGGAGTTTGGTGTAGAACCATGGACTTTTGAACAGAAACTTGGGGAGGCAGTATTTATTCCTGCTGGATGCCCGCATCAAGTCAGGAATCTCAAGTCATGCATAAAAGTTGCTGTAGACTTTGTGTCCCCAGAAAATATCCGTGAGTGTCTACGTTTAACTAATGAGTTCCGCCAGCTTCCCAAGAACCACAAGGCTAGAGAAGATAAGCTTGAGATAAAGAAGATGATAGTTTATGCCGTTGATCAAGCTGTCAAAGACTTGAAAGATTTACTGAAGTGTTCTTGA 2670 0.3993 MEVAVPRQQQPKNQHNEDKIEFSRYSKHSRTVQRKADKIPEYGHNKQELKGEETMRCLKKNNAVGLETTITQGEQVNQPTKDKILKSSKSLGTTKTRKVEEIYKCDDTKLKLCKKGHETQKLTVSNKKRKFEGDLLNDDFEDVLKSRTRRRRMNDVMDVGQNPRKCHQCMKKKRTFCVSCTKCPKMYCMRCVNKWYPDMSVEEIASSCPFCRKNCNCNVCLCSRGMIKTSNRDISDYEKAQYLQYMINLLLPFLKQICHEQSQEDQIEAKLLGKSSFEIEIPQSLCGDVERVYCDHCATSIIDFHRSCPYCSYELCLSCCQEIRDGSITPRAELKFPYVNRGYDYMHGGDPLPVPCDLETLEGHIEPSTVWNAKSDGSISCAPKELGGCGSAVLELRRILPDGWISDLEAKARNMLKIWEIEHTTLQQKEAVSSFTFLRKEAIREGINDNNIYYPESSNTQKEGLLLFQKHWANGEPIIVRDVLKQGTGLSWEPMVMWRALCENMVSEISSKMSEVKAIDCLANCEVEIDTHTFFKGYIEGRTYRDLWPEMLKLKDWPPSDKFEDLLPRHCDEFIRSLPFQEYSDPRAGILNLAVKLPAHVLKPDMGPKTYIAYGIKEELGRGDSVTKLHCDMSDAVNILAHTAEVILTDEQHFIISKLKEAHKAQDEREQCAEERVADSLDDQPCKDNKEHIENKEVFEAKSMKKQPIEINENIFPNNVLEGFTSPAIENESMETGSALWDIFRREDSEKLETYLRKHSKEFRHTYCSPVEQVVHPIHDQCFYLTLEHKKKLKEEFGVEPWTFEQKLGEAVFIPAGCPHQVRNLKSCIKVAVDFVSPENIRECLRLTNEFRQLPKNHKAREDKLEIKKMIVYAVDQAVKDLKDLLKCS* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2232 889 Gene3D Cupin 447 861 - -
Gso7g2232 889 SUPERFAMILY Clavaminate synthase-like 467 883 - -
Gso7g2232 889 MobiDBLite consensus disorder prediction 12 50 - -
Gso7g2232 889 CDD mRING-HC-C4C4_TRIM37_C-VIII 164 212 - -
Gso7g2232 889 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 12 888 IPR045109 GO:0032454|GO:0033169
Gso7g2232 889 Pfam JmjC domain, hydroxylase 725 835 IPR003347 -
Gso7g2232 889 ProSiteProfiles Zinc finger RING-type profile. 166 212 IPR001841 -
Gso7g2232 889 PANTHER LYSINE-SPECIFIC DEMETHYLASE JMJ25-LIKE 12 888 - -
Gso7g2232 889 ProSiteProfiles JmjC domain profile. 586 852 IPR003347 -
Gso7g2232 889 Coils Coil 656 676 - -
Gso7g2232 889 MobiDBLite consensus disorder prediction 1 50 - -
Gso7g2232 889 SMART cupin_9 567 852 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2232 Gso-Chr7 45955011 45960928 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gso7g2232 JmjC 8e-17 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2232 K15601 K21989 gmx:100797860 1823.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2232 7 45955011 45960928 Gso17g0086 17 857208 862999 GST
Gso7g2232 7 45955011 45960928 Gso15g0934 15 8677734 8682354 PCT