Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2216 ATGGCTGACTTGTTGGAATGGTCAAAGCAAGATAAGAAACGAATGCTTCATGTCGTCTACCGTGTTGGTGACCTTGATCGCACCATCAAATTTTACACAGAATGTTTAGGAATGAAGCTTTTGAGGCAAAGAGATATCCCAGAGGAGAAATATGCTAATGCTTTTCTTGGATTTGGCCCTGAAGAATCCCATTTTGTTGTTGAATTAACATATAATTATGGGGTTACCTCGTATGACATTGGCGATGGCTTTGGACATTTTGCAATTGCAACTCAGGACATTTATAAATTGGTTGAGCACATCAGGGCCAAGGGTGGAAACATCACAAGGGAACCTGGTCCAGTTCAAGGTGGAACTACTGTTATCGCCTTTGTTAAGGATCCTGATGGTTATACTTTTGGACTTATCCAAAGACCTACAGTCCATGACCCATTTTGTCAAGTAATGCTTCGTGTTGGTGATTTAGAGCGCTCAATTAAGTTTTATGAAAAGGCTTTGGGCATGAAGGTGGTGAGGAAGGTTGATAAGCCTGAGTACAAGTACACTATAGCTATGCTCGGGTATGGAGAGGAGCACGAGACAACTGTGTTGGAGTTGACATATAACTATGGTGTGACTGAATACTCTAAGGGAAATGCTTATGCACAGATTGCCATTGGTACTGATGATGTATATAAGAGTGCTGAGGTAGTTAACCAAGTCATAAAAGAGGTTGGAGGGAAGATTACTCGGCAACCAGGGCCAATTCCTGGCCTTAATACAAAAACCACTTCGTTTTTAGATCCAGATGGATGGAAAACTGTCTTGGTTGACAACGTTGATTTCTTGGAAGAACTGAAGTGA 843 0.4152 MADLLEWSKQDKKRMLHVVYRVGDLDRTIKFYTECLGMKLLRQRDIPEEKYANAFLGFGPEESHFVVELTYNYGVTSYDIGDGFGHFAIATQDIYKLVEHIRAKGGNITREPGPVQGGTTVIAFVKDPDGYTFGLIQRPTVHDPFCQVMLRVGDLERSIKFYEKALGMKVVRKVDKPEYKYTIAMLGYGEEHETTVLELTYNYGVTEYSKGNAYAQIAIGTDDVYKSAEVVNQVIKEVGGKITRQPGPIPGLNTKTTSFLDPDGWKTVLVDNVDFLEELK* 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2216 280 Gene3D - 141 280 IPR029068 -
Gso7g2216 280 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 147 266 IPR004360 -
Gso7g2216 280 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 133 IPR004360 -
Gso7g2216 280 ProSitePatterns Glyoxalase I signature 1. 17 38 IPR018146 GO:0004462|GO:0046872
Gso7g2216 280 Gene3D - 1 138 IPR029068 -
Gso7g2216 280 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 144 272 IPR037523 -
Gso7g2216 280 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 14 138 IPR037523 -
Gso7g2216 280 PANTHER LACTOYLGLUTATHIONE LYASE-LIKE PROTEIN 4 280 - -
Gso7g2216 280 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 13 144 IPR029068 -
Gso7g2216 280 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 145 272 IPR029068 -
Gso7g2216 280 CDD GlxI_Ni 15 136 - -
Gso7g2216 280 PANTHER LACTOYLGLUTATHIONE LYASE 4 280 - -
Gso7g2216 280 ProSitePatterns Glyoxalase I signature 1. 147 168 IPR018146 GO:0004462|GO:0046872
Gso7g2216 280 TIGRFAM glyox_I: lactoylglutathione lyase 3 146 IPR004361 GO:0004462|GO:0046872
Gso7g2216 280 TIGRFAM glyox_I: lactoylglutathione lyase 146 274 IPR004361 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2216 Gso-Chr7 45842379 45846107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2216 147 271 Calmodulin-binding Proteins AT1G08110 28.477 2.70e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2216 K01759 - gmx:100793089 573.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2216 7 45842379 45846107 Gso15g0912 15 8510439 8516022 PCT
Gso7g2216 7 45842379 45846107 Gso9g0032 9 315798 319850 PCT