Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2206 ATGGGTTGTCATGGTAGCAAGGAGAAAAAATCAAACACTTCCTATGGATCAGCAGCCACTGGTAGTGGTAGTGGTAGTGGCAGTGGTGGTGGTTACAACACTGTTCAGCCATCACCACCTACTACCGATCAGGTTCAAGCATCAGCACAGACTCCAGAAAACCGAAAAGCTTCTCCTACAGTGCAGAAGAAAGCAGACACAAGCATCGTGGGGAAACCCTTTGACGACATAAAGAAATACTACAGTATAGGGAAGGAATTGGGAAGGGGCCAATTCGGGATAACGTATCTGTGCACGGAGAATTCGAGCGGGGGGACGTACGCGTGCAAGTCGATACTGAAGAGGAAGCTGGTCTCGAAGGCGGACAGGGAGGACATGAAGAGGGAGATTCAGATCATGCAGCATTTGTCGGGGCAACCCAACATTGTCGAGTTCAAGGGCGCCTTCGAGGACCGCTTCTCCGTTCACCTCGTCATGGAACTCTGCTCCGGCGGGGAGCTCTTCGATCGTATCATCGCCCAGGGTCACTACTCCGAGAGAGCCGCTGCCTCTCTCTGCCGCTCCATCGTCAACGTTGTCCACATTTGCCACTTCATGGGCGTCATGCACCGCGATCTCAAGCCCGAGAATTTCTTGCTCTCTACCAAGGACGACCACGCCACCCTCAAGGCTACTGATTTTGGTCTCTCTGTCTTCATTGAACAAGGGAAGGTTTACCATGATATGGTTGGCAGTGCTTACTATGTTGCTCCTGAGGTATTGCGTCGTAGTTATGGAAAGGAAATAGATATTTGGAGCGCAGGCATCATATTGTATATTCTTCTGAGTGGTGTACCGCCTTTTTGGGCTGAAACTGAAAAGGGAATATTTAACGCCATATTGGAAGGTGAAATTGATTTTGTAAGTGAACCATGGCCATCGATATCAGACAGTGCTAAAGATCTAGTCAGGAAGATGCTGACACAGGATCCAAAGAAGCGGATTACTTCTGCTCAAGTTCTTGAACACCCATGGATGAGAGAAGGTGGAGACGCATCTGATAAACCAATCGATAGTGCAGTTCTATCCAGAATGAAACAATTCAGGGCAATGAATAAGCTCAAGAAGCTAGCATTGAAGGTTATCGCTGAAAATCTATCAGAAGAGGAGATTAAAGGTCTCAAAGCAATGTTTGCCAATATGGACACTGACAGTAGTGGCACCATCACCTATGAAGAACTGAAGACTGGCTTGGCTCGAATCGGATCAAGACTATCCGAGGCTGAAGTGAAGCAACTCATGGATGCTGCTGATGTTGATGGAAATGGGTCAATTGACTATCTTGAATTCATTTCTGCTACAATGCATAGGCACAGACTTGAACGTGATGAACATCTTTACAAAGCATTCCAGTATTTTGATAAGGATAACAGTGGATATATTACTAGAGATGAATTGGAGACTGCTATGACCCAACATGGAATGGGTGATGAAGCAACAATAAAGGAAATAATCTCTGAGGTGGATACAGATAATGATGGGAGAATAAACTATGAGGAGTTCTGTGCAATGATGAGAAGTGGAATGCCACACCAGGGACAGCTACTTTAA 1590 0.4629 MGCHGSKEKKSNTSYGSAATGSGSGSGSGGGYNTVQPSPPTTDQVQASAQTPENRKASPTVQKKADTSIVGKPFDDIKKYYSIGKELGRGQFGITYLCTENSSGGTYACKSILKRKLVSKADREDMKREIQIMQHLSGQPNIVEFKGAFEDRFSVHLVMELCSGGELFDRIIAQGHYSERAAASLCRSIVNVVHICHFMGVMHRDLKPENFLLSTKDDHATLKATDFGLSVFIEQGKVYHDMVGSAYYVAPEVLRRSYGKEIDIWSAGIILYILLSGVPPFWAETEKGIFNAILEGEIDFVSEPWPSISDSAKDLVRKMLTQDPKKRITSAQVLEHPWMREGGDASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKAMFANMDTDSSGTITYEELKTGLARIGSRLSEAEVKQLMDAADVDGNGSIDYLEFISATMHRHRLERDEHLYKAFQYFDKDNSGYITRDELETAMTQHGMGDEATIKEIISEVDTDNDGRINYEEFCAMMRSGMPHQGQLL* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2206 529 Pfam Protein kinase domain 81 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g2206 529 SUPERFAMILY Protein kinase-like (PK-like) 79 347 IPR011009 -
Gso7g2206 529 ProSiteProfiles EF-hand calcium-binding domain profile. 382 417 IPR002048 GO:0005509
Gso7g2206 529 SUPERFAMILY EF-hand 378 518 IPR011992 -
Gso7g2206 529 Gene3D Phosphorylase Kinase; domain 1 83 166 - -
Gso7g2206 529 ProSitePatterns EF-hand calcium-binding domain. 431 443 IPR018247 -
Gso7g2206 529 SMART efh_1 493 521 IPR002048 GO:0005509
Gso7g2206 529 SMART efh_1 386 414 IPR002048 GO:0005509
Gso7g2206 529 SMART efh_1 458 486 IPR002048 GO:0005509
Gso7g2206 529 SMART efh_1 422 450 IPR002048 GO:0005509
Gso7g2206 529 ProSitePatterns Serine/Threonine protein kinases active-site signature. 201 213 IPR008271 GO:0004672|GO:0006468
Gso7g2206 529 CDD STKc_CAMK 81 338 - -
Gso7g2206 529 SMART serkin_6 81 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g2206 529 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 30 523 - -
Gso7g2206 529 CDD EFh 461 519 IPR002048 GO:0005509
Gso7g2206 529 ProSiteProfiles EF-hand calcium-binding domain profile. 454 489 IPR002048 GO:0005509
Gso7g2206 529 ProSitePatterns EF-hand calcium-binding domain. 467 479 IPR018247 -
Gso7g2206 529 Gene3D Transferase(Phosphotransferase) domain 1 167 346 - -
Gso7g2206 529 PANTHER SERINE/THREONINE-PROTEIN KINASE 30 523 - -
Gso7g2206 529 ProSitePatterns EF-hand calcium-binding domain. 395 407 IPR018247 -
Gso7g2206 529 MobiDBLite consensus disorder prediction 1 66 - -
Gso7g2206 529 Pfam EF-hand domain pair 457 519 IPR002048 GO:0005509
Gso7g2206 529 Pfam EF-hand domain pair 387 447 IPR002048 GO:0005509
Gso7g2206 529 ProSiteProfiles EF-hand calcium-binding domain profile. 418 453 IPR002048 GO:0005509
Gso7g2206 529 MobiDBLite consensus disorder prediction 7 65 - -
Gso7g2206 529 ProSitePatterns Protein kinases ATP-binding region signature. 87 114 IPR017441 GO:0005524
Gso7g2206 529 ProSiteProfiles Protein kinase domain profile. 81 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g2206 529 ProSiteProfiles EF-hand calcium-binding domain profile. 490 524 IPR002048 GO:0005509
Gso7g2206 529 Gene3D - 347 521 - -
Gso7g2206 529 ProSitePatterns EF-hand calcium-binding domain. 502 514 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2206 Gso-Chr7 45750209 45754697 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2206 1 529 EF-hand Containing Proteins AT4G04720 74.217 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gso7g2206 Pkinase 1.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2206 K13412 - gmx:100816859 1033.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2206 7 45750209 45754697 Gso17g0108 17 1038126 1042427 GST