Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2198 ATGGGTTGCAACGAACCTCCCTCTCCCTACCCCGATTCTTCGTCGCTTCTCAAAGACATTTCCAACTTCACCACCCCCAGACGCCCCCCTTTCTCTCTCACCTCCGCCAAATCTCCCGCCACCCAATTCTTCACCGCCTCCAAACACAGCACCTCTTCCTCCTCCTCCTCCTTCCACCGCCGTCCCAACAAATCATCCGCCGCCGCCGCCAAGAAGCTCAAGGCCTTCCAATTGGAGCAGTCCCAGTCCTCCCGCAAGGCCCAAATCAAGAGAGAACACTCCCTCAAATCCCTCGCCAAGTCCCTCTCCGTCTGGCTCAACTTCCTCCTCCAAAACCCTACCTCCTGCGGCTGCCACCTCTCATTCTCCAATGCAGCCCCCGCTCCCGCCACCAATGGCAAGCGAGACGGCCCCCCGGGAACCTCCGTCGTCGGCGTCGATTCCACCTGGCGAACTCCCAAGCGCCAGAGGAAGACCTGGTCCACTAAGGAAAATGCGGCCACTGCGGAGGAGGTTCATGATTCCTCGTTTTCGCAACTCAGAGATTCTCTCAAGGATGTATGCAGTTTCGACGATTTGAAGCAGCGAATGAGAGTTTATCTCAGCCTCACAGTTTGTAAAGAGATCTTCCAACAAATTAATCGCGTCACCAAGACAATTGACGAAGGAAGGCTGAATATGAAGGCGCATTGCCCTATTGTAACTGATGTAGGCTTGAAGGAAAAGGCCACGAGAATTCTCATGTGTTATAATCCAATTTGGCTGCGAATTGGATTGCATATACTTTTTGGTGGTGAATCCTTGGTGTTGAATGGTGATGCTGATTCTGATCAAGATGTTGTGTTCTTGAAAATGGTCATTAACAAGCTATTTTTTTCACATGAGAATTTAGCTAAAGCCTATGCTTATAATAAGATGATTGAAGGTGTTTATCGGTTGGGTTACTATAAGAATTTGGGGAATGTGATTTTGAAGAGAATTTTGTTACTTGTGCTTGTCCTGGATAAAGCTAAATGCCAGAGTTACCTCCCACTGGAGTACGGTATTGATGGGTTGGATGGGGGTTCCCCTTTGTTATTCAAACCAGAATCCTGGATTAAATCAAGTAGTCAGCTGATTCATGAATTTCTGTCGTCTGATGTAATGCACGGAGAAGGCAATCTTCTAACACATTTAGTGATTTTAGGTTACAAATTATCTCATCAACAGGAACCTATTGTTGAGTATGATTTTAGGGTCAAAGATTTATTTGTAGATCTCCAAGATGGATTGAAATTGTGTAGAGCAATTCAGCTCTTGCAGCACAATTCTTCGATCCTCATGAAAATTGTAGTTCCCTCTGATACTCCAAAGAAAAAATTGGCAAACTGTGGTCTTGTCCTACAATATATTAGGCATGCTGGTGGATCATTACTTGATGAAGATGGCATCATGATTGTGGCAGATGATATTGTTAATGGAGACAAAGAACTTACACTTTCCTTGCTGTGGAATATGTTTGTTCATTTGCAGCTACCTCTTTTGGTTGATAAAACAAGTTTAGTTGGGGAAATTTCGAAAATTCGAGGGTTTGGCACGGATCTCATAAACAGTACGAATTCTAGTTCTATGGAATTGCTTTTGAATTGGATTCAGGTAGTTTGTAACAATTATGATTTTGCAATTGTCAATTTTCATTCCCTTGTTGATGGCAAAGCCATCTGGTGCTTACTTGATTATTACTTCCAGAAAGAACTTCATAATTCCAGTTCATTGAAGGAAGTTAATAAGAAAAGTGGCAAGGCATCAATTATGTCGGTGAATGAATATTCAGATGCACTATATAATTTTATATTATCCCAAAAGTTGACAAGGTTACTGGGGAACTTCCCAGAGGTGCTTCAAGTTAGTGAGCTACTTCAATATAATGGTGCTTGCAGTGATCGAAGTGTGGTGATTTTGTTGGTTTTCCTAGCAAACCAATTATTTGTTAAGAAAAATTTGGATCACTTAAATTTCCATAAGCTCTTGGGTTATGACTTCCAAAGTCCAAACCATAGACATTTGAGGATGCTGCAGTGCCTTTCAAATTCTGAATCAATACAAAAGCCTGATGCTTCCGATGTGCATGGAAATGAAGATGCTGCAAGTAAATTCAAGGCCATCCAAGCTTGGTGGCAAGATATGGCTGAAAGAAACTGTATCAACAAACCTGCTGTTTCTAATTTGCAGCGATCCACTACCACTGAATGCAGCACCAACATTAGAAGAGAAAATGCTGCAATAACAATACAACTGCATTTCAGAGGATTGGTTGCACGGCGCAAGTTTCTGAAGATGGTAAATGCTGTTACCCTTTTGCAAACTGGTTTCAGAGCTTGGCTAAAAGTGAAGCAAGGGTCAGTCTGCATGATATTATCTACTGTTCAAGTCTGTGACTCTTCATGTGAAATATTGAAGCAATCAGAAACATATAAGAGATATGCCATGCTTTTCATTCATAGACATTCTTTTTTGAAGTTGAAGAGGTCAGCACAGCTTATCCAGCAAGCAGTTAGGAGTTGGCTCTATCGGAGGCATCAGCAAGAATGTAGTACAAGTCCTGATCTTATGATTTCAGATATGGTGGCAGCTGCTATTACTGTTCAGAAATTTGTCCATGGTTGGCTGGCACGATCTAGATATATTCATCAGCTAGATCAGAAAGAGAAAGCTTTAAATTATTCCCAACAGAAAGTCACTTTTGATCTTCAAACAAATGCAGCAATTATCATTCAGCTTGCATGGAAAAAGTTCATATGCTGCAAGTCTACTCAGAAGCAACACCTGTTTGCAACTAAAATTCAACAAAATTTCCGAAGGTGGTTGTTGAGAAAAAGTTTTTTAAATCAGATTCAAGCTGTCATCAAAATTCAATCTTATTTTCGAATGTGGAGAAGTGTAAATGCTTTTCAGCACTTCAAAATTGAGTATAAGGCAGCTGTTGCCATTCAATCTTACTTACGGGGATGGTTTGCACGAAAGAATGCTTGTGTGCGTATGAATCACCTGTTTGCAACTAAAATTCAACGAAATTTCCGTACGTGGTTGTTGAGAAAAAGTTTTTTGAATCAGATTCAAGCTATCATAAAAATTCAATCATACTTTCGAATGCGGAGATGTGTAATTGCTTTTAAGCACTTCAAAATTGAGTTTAAGGCAGCTGTTGTCATTCAATCTTTCTTACGGTGCTGGTTTGCACGAAAGGATGCTTGTGCGCGTAGAAATCACATTGTTGAAATTCAAAGGCATTGCCGTGGTTGGCTAGTGAAGCGGGACTTCTTGTTCCGAAGAGATGCTGTAGTAAAGATCCAGTGTGCCATTCAAAGCTTGAAGTGCCAGAAGGCCCTCAATTGCCAGAAAGATGCCGCTTTGGAGATTCAACGCTTTATAAGGGGGCATTTAACTCGGAATCAGCTATTAGGTTCCAAGTCACACACAGTTACTCCTATTAGTTGCATTTCAAGACCATTTGGCTTTCGTAGTTTTCAACTGGAACTATTCTTGTTTTCGGTTGTGAAATTGCAACGGTGGTGGAAGGGTCTCTTGTTGCTTAAACTAAAGAATAAATCAGCCATCATTATTCAGTCATGTACACGTGGGTGGATAGCTAGGCGAAAGGCTACTGTTTTCAGACACCATGTTGTTATCCAAGAAGATGCTGCATTGGTGATTCAACGCTATATTAGGGGGCATTTAATTCGAAATCGGAATTTAGGTGGTGCTTCTAACCTAAGTGAAGTCGTTCCTGCTGACTACATTTCAAGACCTTTTGGCTGTCGTAGTTTTCAACTGGAACTATTTTTGCTTTCAGTTGTGAAATTGCAACGATGGTGGAAGGGTCTCTTGTTACAGAAATTGATGACAAAGTCTGCCATTGTTATTCAGTCTTGTACTCGTGGGTGGATAGCCAGGCGAAAGGCAACTGTTCAGAAACATCGTATTATTGTCATCCAATCCTACTGGAAAGGTTACCTTGCACGTAAAGAGCCAAAGGAACAGTTATTGGATTTGCGCTTGAGAATGCAAAAGTCTGCCAGAAATGTGGATGACAGCAAGCGTCTCATAAACCGACTCTTGGCAGCGCTTTCAGAGCTACTTAATATGAAGAGTCTTAGTAACATCCTTCATACTTGTTCAACATTGGACATGGCTACAGGACATTCTCAGAAATGTTGTGAAGAACTTGTGGCTGCAGGGGCTATCGACACCTTGTTGCAGCTAATTCAAACAATCAGCCGGAGTATACCTGATCAGGAGGTTCTAAAGCATGCTTTGTCAACTCTCCGAAATCTCGCCCGCTATCCTCATCTACTACAAGTATTGATCCAAAGTCGTAGTTCTGTACAGATAATTGTCTTGGAGTTATTGAGGAATAAAAACGAGGGCTACTTCGTTGCTTCTGAACTTTTGAAGAAGATATGTTCAACTCGTATAGGCATTGAGAGGATATTCAAGTCCCCTGCCCTGCTAAAACGATTGCACGGTCTTGTTGAGGACCTTACACGGAAGGGAATTTACGAGAAAAGAAATCCTAGGGCTCCTAGCCTGGCTATCAGAAAAGACAGAGAGAGAAGATTGAAGGAGGCTGCTGAGATTCTGAAGCTGATAACAACGCCTGATTTTTTTTCATCAAGTTCTGATGTGAAATTGTAG 4674 0.4174 MGCNEPPSPYPDSSSLLKDISNFTTPRRPPFSLTSAKSPATQFFTASKHSTSSSSSSFHRRPNKSSAAAAKKLKAFQLEQSQSSRKAQIKREHSLKSLAKSLSVWLNFLLQNPTSCGCHLSFSNAAPAPATNGKRDGPPGTSVVGVDSTWRTPKRQRKTWSTKENAATAEEVHDSSFSQLRDSLKDVCSFDDLKQRMRVYLSLTVCKEIFQQINRVTKTIDEGRLNMKAHCPIVTDVGLKEKATRILMCYNPIWLRIGLHILFGGESLVLNGDADSDQDVVFLKMVINKLFFSHENLAKAYAYNKMIEGVYRLGYYKNLGNVILKRILLLVLVLDKAKCQSYLPLEYGIDGLDGGSPLLFKPESWIKSSSQLIHEFLSSDVMHGEGNLLTHLVILGYKLSHQQEPIVEYDFRVKDLFVDLQDGLKLCRAIQLLQHNSSILMKIVVPSDTPKKKLANCGLVLQYIRHAGGSLLDEDGIMIVADDIVNGDKELTLSLLWNMFVHLQLPLLVDKTSLVGEISKIRGFGTDLINSTNSSSMELLLNWIQVVCNNYDFAIVNFHSLVDGKAIWCLLDYYFQKELHNSSSLKEVNKKSGKASIMSVNEYSDALYNFILSQKLTRLLGNFPEVLQVSELLQYNGACSDRSVVILLVFLANQLFVKKNLDHLNFHKLLGYDFQSPNHRHLRMLQCLSNSESIQKPDASDVHGNEDAASKFKAIQAWWQDMAERNCINKPAVSNLQRSTTTECSTNIRRENAAITIQLHFRGLVARRKFLKMVNAVTLLQTGFRAWLKVKQGSVCMILSTVQVCDSSCEILKQSETYKRYAMLFIHRHSFLKLKRSAQLIQQAVRSWLYRRHQQECSTSPDLMISDMVAAAITVQKFVHGWLARSRYIHQLDQKEKALNYSQQKVTFDLQTNAAIIIQLAWKKFICCKSTQKQHLFATKIQQNFRRWLLRKSFLNQIQAVIKIQSYFRMWRSVNAFQHFKIEYKAAVAIQSYLRGWFARKNACVRMNHLFATKIQRNFRTWLLRKSFLNQIQAIIKIQSYFRMRRCVIAFKHFKIEFKAAVVIQSFLRCWFARKDACARRNHIVEIQRHCRGWLVKRDFLFRRDAVVKIQCAIQSLKCQKALNCQKDAALEIQRFIRGHLTRNQLLGSKSHTVTPISCISRPFGFRSFQLELFLFSVVKLQRWWKGLLLLKLKNKSAIIIQSCTRGWIARRKATVFRHHVVIQEDAALVIQRYIRGHLIRNRNLGGASNLSEVVPADYISRPFGCRSFQLELFLLSVVKLQRWWKGLLLQKLMTKSAIVIQSCTRGWIARRKATVQKHRIIVIQSYWKGYLARKEPKEQLLDLRLRMQKSARNVDDSKRLINRLLAALSELLNMKSLSNILHTCSTLDMATGHSQKCCEELVAAGAIDTLLQLIQTISRSIPDQEVLKHALSTLRNLARYPHLLQVLIQSRSSVQIIVLELLRNKNEGYFVASELLKKICSTRIGIERIFKSPALLKRLHGLVEDLTRKGIYEKRNPRAPSLAIRKDRERRLKEAAEILKLITTPDFFSSSSDVKL* 1558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2198 1557 ProSiteProfiles IQ motif profile. 750 778 IPR000048 GO:0005515
Gso7g2198 1557 ProSiteProfiles IQ motif profile. 1317 1345 IPR000048 GO:0005515
Gso7g2198 1557 ProSiteProfiles IQ motif profile. 1057 1086 IPR000048 GO:0005515
Gso7g2198 1557 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1406 1439 IPR000225 GO:0005515
Gso7g2198 1557 ProSiteProfiles IQ motif profile. 983 1012 IPR000048 GO:0005515
Gso7g2198 1557 MobiDBLite consensus disorder prediction 128 147 - -
Gso7g2198 1557 ProSiteProfiles IQ motif profile. 1294 1321 IPR000048 GO:0005515
Gso7g2198 1557 Gene3D - 1349 1505 IPR011989 -
Gso7g2198 1557 ProSiteProfiles IQ motif profile. 1194 1221 IPR000048 GO:0005515
Gso7g2198 1557 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1049 1147 IPR027417 -
Gso7g2198 1557 ProSiteProfiles IQ motif profile. 934 963 IPR000048 GO:0005515
Gso7g2198 1557 Pfam IQ calmodulin-binding motif 1295 1313 IPR000048 GO:0005515
Gso7g2198 1557 Pfam IQ calmodulin-binding motif 1012 1028 IPR000048 GO:0005515
Gso7g2198 1557 Pfam IQ calmodulin-binding motif 959 973 IPR000048 GO:0005515
Gso7g2198 1557 Pfam IQ calmodulin-binding motif 1084 1100 IPR000048 GO:0005515
Gso7g2198 1557 Pfam IQ calmodulin-binding motif 752 770 IPR000048 GO:0005515
Gso7g2198 1557 Pfam IQ calmodulin-binding motif 1226 1243 IPR000048 GO:0005515
Gso7g2198 1557 Pfam IQ calmodulin-binding motif 870 888 IPR000048 GO:0005515
Gso7g2198 1557 Pfam IQ calmodulin-binding motif 1320 1336 IPR000048 GO:0005515
Gso7g2198 1557 Pfam IQ calmodulin-binding motif 985 1002 IPR000048 GO:0005515
Gso7g2198 1557 Pfam IQ calmodulin-binding motif 938 954 IPR000048 GO:0005515
Gso7g2198 1557 Pfam IQ calmodulin-binding motif 1128 1146 IPR000048 GO:0005515
Gso7g2198 1557 Pfam IQ calmodulin-binding motif 1059 1076 IPR000048 GO:0005515
Gso7g2198 1557 Pfam IQ calmodulin-binding motif 1196 1213 IPR000048 GO:0005515
Gso7g2198 1557 SUPERFAMILY Calponin-homology domain, CH-domain 329 587 IPR036872 -
Gso7g2198 1557 PANTHER UNCHARACTERIZED 7 1002 - -
Gso7g2198 1557 PANTHER UNCHARACTERIZED 1005 1244 - -
Gso7g2198 1557 PANTHER UNCHARACTERIZED 1226 1544 - -
Gso7g2198 1557 ProSiteProfiles IQ motif profile. 1126 1155 IPR000048 GO:0005515
Gso7g2198 1557 ProSiteProfiles Calponin homology (CH) domain profile. 382 504 IPR001715 GO:0005515
Gso7g2198 1557 Gene3D - 529 658 IPR036872 -
Gso7g2198 1557 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 940 1002 IPR027417 -
Gso7g2198 1557 SMART iq_5 982 1004 IPR000048 GO:0005515
Gso7g2198 1557 SMART iq_5 867 889 IPR000048 GO:0005515
Gso7g2198 1557 SMART iq_5 956 978 IPR000048 GO:0005515
Gso7g2198 1557 SMART iq_5 1316 1338 IPR000048 GO:0005515
Gso7g2198 1557 SMART iq_5 1223 1245 IPR000048 GO:0005515
Gso7g2198 1557 SMART iq_5 933 955 IPR000048 GO:0005515
Gso7g2198 1557 SMART iq_5 1030 1052 IPR000048 GO:0005515
Gso7g2198 1557 SMART iq_5 1193 1215 IPR000048 GO:0005515
Gso7g2198 1557 SMART iq_5 1293 1315 IPR000048 GO:0005515
Gso7g2198 1557 SMART iq_5 749 771 IPR000048 GO:0005515
Gso7g2198 1557 SMART iq_5 1079 1101 IPR000048 GO:0005515
Gso7g2198 1557 SMART iq_5 833 855 IPR000048 GO:0005515
Gso7g2198 1557 SMART iq_5 1007 1029 IPR000048 GO:0005515
Gso7g2198 1557 SMART iq_5 1125 1147 IPR000048 GO:0005515
Gso7g2198 1557 SMART iq_5 1056 1078 IPR000048 GO:0005515
Gso7g2198 1557 SMART iq_5 772 794 IPR000048 GO:0005515
Gso7g2198 1557 Gene3D - 398 504 IPR036872 -
Gso7g2198 1557 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 1005 1244 - -
Gso7g2198 1557 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 7 1002 - -
Gso7g2198 1557 PANTHER ABNORMAL SPINDLE MICROTUBULE ASSEMBLY 1226 1544 - -
Gso7g2198 1557 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1013 1076 IPR027417 -
Gso7g2198 1557 SMART arm_5 1395 1440 IPR000225 GO:0005515
Gso7g2198 1557 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1276 1340 IPR027417 -
Gso7g2198 1557 ProSiteProfiles IQ motif profile. 1224 1253 IPR000048 GO:0005515
Gso7g2198 1557 MobiDBLite consensus disorder prediction 1 69 - -
Gso7g2198 1557 ProSiteProfiles IQ motif profile. 1012 1037 IPR000048 GO:0005515
Gso7g2198 1557 Pfam Calponin homology (CH) domain 412 502 IPR001715 GO:0005515
Gso7g2198 1557 ProSiteProfiles IQ motif profile. 1080 1109 IPR000048 GO:0005515
Gso7g2198 1557 MobiDBLite consensus disorder prediction 8 63 - -
Gso7g2198 1557 Gene3D - 1058 1104 - -
Gso7g2198 1557 Gene3D - 1008 1057 - -
Gso7g2198 1557 Gene3D - 1192 1248 - -
Gso7g2198 1557 Gene3D - 1105 1155 - -
Gso7g2198 1557 Gene3D - 1292 1341 - -
Gso7g2198 1557 Gene3D - 868 934 - -
Gso7g2198 1557 Gene3D - 749 794 - -
Gso7g2198 1557 Gene3D - 935 983 - -
Gso7g2198 1557 Pfam Armadillo/beta-catenin-like repeat 1395 1440 IPR000225 GO:0005515
Gso7g2198 1557 ProSiteProfiles IQ motif profile. 957 986 IPR000048 GO:0005515
Gso7g2198 1557 ProSiteProfiles IQ motif profile. 868 897 IPR000048 GO:0005515
Gso7g2198 1557 SUPERFAMILY ARM repeat 1363 1507 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2198 Gso-Chr7 45693207 45703759 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2198 969 1100 Myosins gene family AT4G33200 33.333 5.35e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2198 K16743 - gmx:100788871 3041.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2198 7 45693207 45703759 Gso17g0119 17 1100539 1111022 GST