Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2179 ATGAAGAAGCAAGTAGAAGCAATTGCGCGAGTTTTGCATTTATTTCAATCCTACAAAGAGGACAATATTCCGTGCAAAATCGACGAGGGTCTCTATTTGGGTTCGATTGCCACTGCAGCTAACAAGCCTGCTTTGAAAGACTGTAATATTACTCACGTTTTGACTGTGGCTGGTAGAATACCACCTGCACATCCTCACGATTTTGTCTATAAAATTATAGACGTTGTTGACAAAGATGATGAAGACTTAAAACAATACTTCAATGAGTGTTTTGATTTTATTGATGAAGCCAAAAGACACGATGGAGGTGTTTTGGTTCACTGTTTTGCTGGAAGATCCAGGAGTGTGACTATAGTTGTGGCATATCTGATGAAGACTCGTGGAATGAGCTTTTTTGAAGCTCTGCAACATGTAAGGAGTATACGACCAGCAGCAGGTCCCAATCAGGGTTTCATTTGTCAGCTGCAGGATTTTGAAAAGTCTCTTCAAGGTGCCAATAAATTGCATTAG 510 0.402 MKKQVEAIARVLHLFQSYKEDNIPCKIDEGLYLGSIATAANKPALKDCNITHVLTVAGRIPPAHPHDFVYKIIDVVDKDDEDLKQYFNECFDFIDEAKRHDGGVLVHCFAGRSRSVTIVVAYLMKTRGMSFFEALQHVRSIRPAAGPNQGFICQLQDFEKSLQGANKLH* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2179 169 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 22 167 IPR029021 -
Gso7g2179 169 SMART dsp_5 23 161 IPR020422 GO:0006470|GO:0008138
Gso7g2179 169 PANTHER BNAA01G23680D PROTEIN 2 167 - -
Gso7g2179 169 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 2 167 - -
Gso7g2179 169 Gene3D Protein tyrosine phosphatase superfamily 25 169 IPR029021 -
Gso7g2179 169 Pfam Dual specificity phosphatase, catalytic domain 31 160 IPR000340 GO:0008138|GO:0016311
Gso7g2179 169 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 91 143 IPR000387 GO:0016311|GO:0016791
Gso7g2179 169 CDD DSP 24 157 - -
Gso7g2179 169 ProSiteProfiles Dual specificity protein phosphatase domain profile. 23 164 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2179 Gso-Chr7 45550793 45553700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2179 25 164 Protein tyrosine phosphatase (PTP) family AT3G06110 61.429 2.33e-58 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2179 - - gmx:100806191 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2179 7 45550793 45553700 Gso17g0134 17 1225355 1228346 GST