Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2170 ATGGCACAACAAGTTCAAGTATTCACTACATGTTATTGTCCACCACCTCAATACGAATACCTTCGCCGAATCGGAATTTCGAAGCAATTAAAGTGTGCTACTATTCCTTCACTATCAGTTTCCGCCTCTTCTGTTCTTCGTAACGCGTCGTTTTGCTGCACCTCTTCTGTCCACTGCAATTTACCTTCTTCACCCAAAATCTTCGTCAAAGGGCTTCCTCTCTCAACCTCTGAAGGACGTCTGATGAAGGTGTTTTCAGAGTTTGGTGACGTTACTCTAGTCCAGCTTCCAATAGATAGAGAGTCTGGGCAGTCTTTAGGATTTGCATATATTTGGTTTGTCAAGGAAGAGTCTGCCCAATTGGCTGTGCAAGAGATGAATGGAAAGGTTTATTTATGTTACAATTGCAAAGCCTGGATCATCAAAAAGTTCCAAGAGGACAACAGCCTACAAATTTTAATCATATGA 468 0.4167 MAQQVQVFTTCYCPPPQYEYLRRIGISKQLKCATIPSLSVSASSVLRNASFCCTSSVHCNLPSSPKIFVKGLPLSTSEGRLMKVFSEFGDVTLVQLPIDRESGQSLGFAYIWFVKEESAQLAVQEMNGKVYLCYNCKAWIIKKFQEDNSLQILII* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2170 155 PANTHER RNA-BINDING MOTIF PROTEIN, X-LINKED 2 45 131 - -
Gso7g2170 155 SMART rrm1_1 66 141 IPR000504 GO:0003723
Gso7g2170 155 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 4, MITOCHONDRIAL ISOFORM X1 45 131 - -
Gso7g2170 155 Gene3D - 56 144 IPR012677 -
Gso7g2170 155 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 67 131 IPR000504 GO:0003723
Gso7g2170 155 SUPERFAMILY RNA-binding domain, RBD 61 132 IPR035979 GO:0003676
Gso7g2170 155 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 65 146 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2170 Gso-Chr7 45455632 45458603 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2170 67 131 Eukaryotic Initiation Factors Gene Family AT3G11400 41.538 8.19e-10 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2170 - - gmx:100791917 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2170 7 45455632 45458603 Gso17g0141 17 1313347 1316235 GST