Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2161 ATGCCGCATGATCAGAGAAAAAAGTCGTCTGTAGATATAGACTTCTTTACAGAATACGGCGAAGGGAGTAGATACAAAATAGAGGAAGTAATAGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATCAATGACATATTTGAACATGTTTCTGATGCCACTCGCATTCTTCGTGAGATCAAGCTTCTTAGACTCTTACACCATCCTGATATTGTGGAGATCAAGCATATTTTGTTACCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTTTTTGAGCTTATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATTTGACTCCAGAGCATTATCAGTTTTTTCTCTATCAGCTTCTTCGAGGCTTGAAGTATATACACACAGCAAATGTATTTCACCGAGATCTAAAGCCAAAAAATATTTTAGCAAATGCTGACTGCAAACTGAAGATTTGTGACTTCGGTCTTGCCAGAGTGGCTTTCAATGATACGCCAACTGCTATATTTTGGACAGATTACGTTGCAACAAGGTGGTATAGAGCTCCTGAATTGTGTGGATCCTTTTTCTCCAAGTATACCCCAGCTATAGACATATGGAGCATTGGCTGCATTTTCGCAGAACTTTTAACTGGAAAACCTCTTTTCCCAGGGAAGAATGTTGTCCATCAATTGGACCTCATGACTGATTTTCTTGGAACACCATCTCCTGAAGCCATTGCTAGGGTACGGAATGAGAAAGCTCGGAGATACTTGTGTTGCATGCGTAAGAAGAAGCCAGTTCCTTTCTCCCAAAAGTTTCCTAATGTAGACCCCCTTGCTCTTCGTGTGTTAGAAAGAATGCTGGCATTTGAACCTAAGGATCGACCTACTGCTGAAGAGGCTCTAGCATATCCATATTTTAAAGGCTTGGCCAAGGTTGAGAGAGAACCTTCTGCTCAGCCAGTTACCAAGATGGAATTTGAATTCGAGAGACGTAGGATAACAAAGGAAGATGTGCGAGAGCTTATATACCGAGAGATTCTGGAGTACCATCCAAAGATGTTAAAAGAACATCTAGAGGGAGAAGAGCCAACAGGATTCATGTATCCAAGTGCTGTGGACCACTTCAAGAAACAATTTGCATATCTTGAGGAGCATTATGGAAAAGCTGGAACTGTTACTCCACCCGAGAGGCAACACGCATCATTACCTAGGCCATGTGTGTTGTATTCTGATAACTCAAGACAAAATATGGCTGAGGTTGCAGATGATATCTCCAAGTGTATCATCAAAGAAGTTGAGAAGCCAGCCATGGACAGGACTGGTGGTATCCCAATGACCAGGCTTCCTTTACAAGCTCCTCAAAATATTCAAGTTGCTTCAGGTGTTGCTGCGCGGCCCGGAAAAGTTGTAGGTTCAATATTGCATTACAACAACTGTGGGGCAGCAGTTACAGCTGATGCTGAGCAGCGGAGGATGGGTAGAAATCCATCTGTTTCAGCCCAGTATGCTGCTCCAAGCAGTTCATATCCAAGACGAAACCCAAGCTGTAAAAGTGAGAGGGCAGAAGAAGTGATCGAAGGTGCTAATGGACTTCAGACTAAGCCTCAACACATAACACAAAAAGTTGCTGCTGCTGCTCTAGGGGGACCTGGTGGTAATTGGTATTGA 1698 0.4234 MPHDQRKKSSVDIDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLHHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSPEAIARVRNEKARRYLCCMRKKKPVPFSQKFPNVDPLALRVLERMLAFEPKDRPTAEEALAYPYFKGLAKVEREPSAQPVTKMEFEFERRRITKEDVRELIYREILEYHPKMLKEHLEGEEPTGFMYPSAVDHFKKQFAYLEEHYGKAGTVTPPERQHASLPRPCVLYSDNSRQNMAEVADDISKCIIKEVEKPAMDRTGGIPMTRLPLQAPQNIQVASGVAARPGKVVGSILHYNNCGAAVTADAEQRRMGRNPSVSAQYAAPSSSYPRRNPSCKSERAEEVIEGANGLQTKPQHITQKVAAAALGGPGGNWY* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2161 565 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Gso7g2161 565 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 479 - -
Gso7g2161 565 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g2161 565 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Gso7g2161 565 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Gso7g2161 565 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g2161 565 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g2161 565 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Gso7g2161 565 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gso7g2161 565 MobiDBLite consensus disorder prediction 504 524 - -
Gso7g2161 565 MobiDBLite consensus disorder prediction 497 525 - -
Gso7g2161 565 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 479 - -
Gso7g2161 565 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2161 Gso-Chr7 45370039 45376755 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2161 1 565 MAP Kinase Gene Family AT5G19010 78.163 0.0 910
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gso7g2161 Pkinase 7.6e-67 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2161 7 45370039 45376755 Gso17g0148 17 1395320 1407954 GST
Gso7g2161 7 45370039 45376755 Gso15g0867 15 7987758 7994019 PCT
Gso7g2161 7 45370039 45376755 Gso11g2399 11 40010388 40016857 PCT
Gso15g0867 15 7987758 7994019 Gso7g2161 7 45370039 45376755 PCT
Gso11g2399 11 40010388 40016857 Gso7g2161 7 45370039 45376755 PCT