Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2154 ATGGCCTCCTCTCCCCCTCCTCCCGATCCCCCCACTGCCGTCCCCCTCGCCCTCGTCCCCATCCCCGCTCCACCCTCCTCCCGCCGCCTCCCTCCTCCCTGCTGGTCCCCCGATGAAACCCTCGCCCTCATCGACGCCTACCGCGACAAGTGGTACTCCCTCGGCCGCGGCAACCTCAAGGCCACCCACTGGCAAGAGGTCGCCGACGCCATCGCAAGCCGCTGCCCCAACGCCTCCCCTCCCAAAACCCCCATCCAGTGCCGCCACAAAATGGAGAAGCTCCGCAAGCGCTACCGCACCGAGATCCAACGCTCTCGCTCCCTCCCCGTTTCGCGATTCAACTCCTCCTGGGTCCACTTCAAGCTCATGGACTCCATGGAGAAAGGTCCCTCCCCTGTTAAACCCGAAAACGTTTCCGATAATAGTGATAACGATAACGAGGATGATGACGATGATCAAGATCTGTACCAGGAGATCAACCACAACGGCCACATCAGGAGCTTGAACAAGATGTATAGGAATGGCTTTCCGGGTTCTGGTGCCGGTTCCGGTGCTGGTGGGTTTAGGATTCGAATTCCTACTGGGTTGGGTACGGTGCAGCCTGGATCTGGCTCCAAGGTGTTTGGGAATCAGAAATTCAGCCCCAATTTGAATCAAAACCCTAACCCTAATCTCGGGAATAAGAGGGAGAGGGACCCGGTGGGGGAGTTAGTGGCTGCGATTAAGGTTTTGGGAGATGGGTTTGTGAGAACGGAACAGATGAAGATGGAGATGGCGAGGGAGATTGAGACCATGCGGATGGAGATGGAGATGAAGCGCACTGAGATGATTCTAGAATCGCAACAGCGGATTGTGGAGGCATTTGCCAAGGCCATTTCGGAAAAGAAGAAGAAGGCCAAGACTGTGTCGTCGCCACAACAGCCTTAA 927 0.5685 MASSPPPPDPPTAVPLALVPIPAPPSSRRLPPPCWSPDETLALIDAYRDKWYSLGRGNLKATHWQEVADAIASRCPNASPPKTPIQCRHKMEKLRKRYRTEIQRSRSLPVSRFNSSWVHFKLMDSMEKGPSPVKPENVSDNSDNDNEDDDDDQDLYQEINHNGHIRSLNKMYRNGFPGSGAGSGAGGFRIRIPTGLGTVQPGSGSKVFGNQKFSPNLNQNPNPNLGNKRERDPVGELVAAIKVLGDGFVRTEQMKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAISEKKKKAKTVSSPQQP* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2154 308 MobiDBLite consensus disorder prediction 199 230 - -
Gso7g2154 308 SMART 118neu2 42 131 IPR006578 -
Gso7g2154 308 MobiDBLite consensus disorder prediction 126 154 - -
Gso7g2154 308 Gene3D - 35 100 - -
Gso7g2154 308 MobiDBLite consensus disorder prediction 199 226 - -
Gso7g2154 308 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 3 304 IPR044823 -
Gso7g2154 308 PANTHER TRANSCRIPTION FACTOR 3 304 - -
Gso7g2154 308 Pfam Myb/SANT-like DNA-binding domain 33 126 IPR044822 -
Gso7g2154 308 ProSiteProfiles Myb-like domain profile. 35 95 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2154 Gso-Chr7 45330108 45331034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2154 11 126 Trihelix Transcription Factor Family AT3G14180 36.000 4.19e-19 85.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso7g2154 Myb_DNA-bind_4 8.5e-21 CL0123