Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2149 ATGGGTTGTGTCCATGGCAAGTCTTGCTGTGGCGACAGTTCTTCATCAGATGATGGTTCTAGGGATTACCGAGAACTTGGCTTCATTCATGGCCACAGGAAGAACGTGCTCGCTCAGAGATCATTGAAGCATGTTCCTGTTCCTTCCCACAACTTCATTTTGGAGTACACTTTCCTCAGTCAGCGGGGGTACTACCCTGATTCACCTGATAAAGAAAACCAAGATAGTTTCTGCATCACTACACAACTCCAAGGTAACCCCAATGTCCATTTCTTTGGTGTCTATGATGGGCATGGCCAATTTGGTAGCCAGTGTTCGAATTTTGTTAAGCATAGGCTGGTTGAGAAGTTGTCAAATGACCCTGCATTGTTGGAGGACCCTGTTCAGGCTTACAATTCTGCATTCTTGGCAACAAATCAAGAATTGCGTAGTACTAGTGAGATTGATGATTCTATGAGTGGCACCACCGCGATTACGGTGCTTGTTATTGGTGACACTCTTTATGTTGCTAATGTTGGTGATTCAAGAGCGGTGCTGGCTGTTAGGGATGGGAATCACATTGTTGCCGAGGACTTGTCCTCTGATCAGACGCCATTTCGGAGGGATGAATATGAGAGAGTGAAACTTTGTGGGGCAAGGGTGTTGAGTGTTGATCAAGTGGAAGGGCTAAAGGATCCAGATATCCAGCATTGGGGTGATGAAGAGAGTCGGGGTGGCGATCCTCCAAGATTGTGGGTTCCTAATGGGATGTATCCTGGAACTGCATTTACAAGGAGTATAGGGGATAGTTTGGCAGAGACAATTGGTGTCATTGCTATTCCGGAGGTGAAAACGGTTCAGCTTACACCTAATCATCTTTTCTTTGTTGTGGCAAGTGATGGCATATTTGAATTCCTGACAAGCCAAACTGTTGTTGATATGGCAGCAAGCTATATGGATCCTCGTGATGCATGTTCAGCTATTGCAGAGAAGTCGTATAAACTATGGTTGGAACTTGAGAACAGAACAGATGATATAACAATCATCATTGTTCAGATCAAAGGTACATCTGGAGTTGGATCCGATGAGATCAATGGTGGGGGTACTGTAATGAATTCCAGGACAGGAACTCATGAGATATCTGCTACCCCTGGATCTAATGTTTATCGTTCTGTCAGAAACAGTTTATCCGATTTGCACTCCTGTCAGCATGTGGCTTCAGTGACGAGCGCAGCGATAGAGGTTCACTCTCCAGCATGTCCAAGACCAATTGAATGA 1257 0.4511 MGCVHGKSCCGDSSSSDDGSRDYRELGFIHGHRKNVLAQRSLKHVPVPSHNFILEYTFLSQRGYYPDSPDKENQDSFCITTQLQGNPNVHFFGVYDGHGQFGSQCSNFVKHRLVEKLSNDPALLEDPVQAYNSAFLATNQELRSTSEIDDSMSGTTAITVLVIGDTLYVANVGDSRAVLAVRDGNHIVAEDLSSDQTPFRRDEYERVKLCGARVLSVDQVEGLKDPDIQHWGDEESRGGDPPRLWVPNGMYPGTAFTRSIGDSLAETIGVIAIPEVKTVQLTPNHLFFVVASDGIFEFLTSQTVVDMAASYMDPRDACSAIAEKSYKLWLELENRTDDITIIIVQIKGTSGVGSDEINGGGTVMNSRTGTHEISATPGSNVYRSVRNSLSDLHSCQHVASVTSAAIEVHSPACPRPIE* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2149 418 SUPERFAMILY PP2C-like 46 348 IPR036457 -
Gso7g2149 418 Gene3D - 54 349 IPR036457 -
Gso7g2149 418 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Gso7g2149 418 ProSiteProfiles PPM-type phosphatase domain profile. 55 346 IPR001932 -
Gso7g2149 418 CDD PP2Cc 71 346 IPR001932 -
Gso7g2149 418 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 33 400 - -
Gso7g2149 418 Pfam Protein phosphatase 2C 79 324 IPR001932 -
Gso7g2149 418 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 33 400 - -
Gso7g2149 418 SMART PP2C_4 51 344 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2149 Gso-Chr7 45288830 45292473 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2149 1 350 PP2C-type Phosphatase Gene Family AT3G06270 70.822 4.79e-176 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2149 - - gmx:100797866 820.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2149 7 45288830 45292473 Gso17g0160 17 1507265 1510814 GST
Gso7g2149 7 45288830 45292473 Gso15g0852 15 7841854 7846096 PCT
Gso7g2149 7 45288830 45292473 Gso11g2412 11 40152992 40157169 PCT
Gso15g0852 15 7841854 7846096 Gso7g2149 7 45288830 45292473 PCT
Gso11g2412 11 40152992 40157169 Gso7g2149 7 45288830 45292473 PCT