Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2148 ATGATTTCATTGGTTGCCAGTTGTAGCAGTCAAATGTCTCCTTCAGTTTCTTGTCAAGAAAAAGGAAGTAGGAACAAAAGAAAATTCAGAGTTGATCCACCTCTAGGGGAGCCAAATAAGTTCATTCCTGCACCTCAACTCAAGTGCTTCAGTTATGAATTCTCTGCTGAGAGGTTTGAAATAACCCCAGGTCATGGACAAGCTGCTGCTTGTGACCTGTGTGGTGTTAGCCAAGATTATTCTGATGGATTGAAACTTGGCCTTGGATTGTATAATCCTGGAACATCTGAGGTCGGGCCTAGTCAATCTAAGGACGAACCTGAGACAGATGAAATTAATGATGCAGATTGGAGCGATCTCACAGAAGCCCAGCTGGAAGAACTTGTCCTGACTAATTTGGACACCATTCTCAAGAGTGCAATTAAAAAAATTGTAGCATGCGGCTACACTGAAGACGTTGCTACTAAGGCCATTTTAAGACCTGGCATCTGTTATGGATGTAAAGATACTTTGTCTAATATTGTTGATAATTCTTTAGCATTTCTTAGAAATGGTCAAGAGATTGATACATCACGAGAGCACTATTTTGAAGATCTAGTGCAGCTTGAGAAGTATAACTTGGCTGAATTGGTTTGTGTTCTTCGAGAGGTTAGGCCATTCTTCAGTGTTGGGGATGCAATGTGGTGTTTGTTAATTTGTGACATGAATGTGTCACATGCTTGTGCAATGGATTGTAACCCTTTAAGTAGTTTAGGTAATGATAATTCTACTGGTGGTCCATCTAACCAAGCTGAATCACTATCAAAAGCAGAAACCAAATGTCCTGAACCGAGTCTTATAAGTCCTAGTAAATCAATTCCTACATGTTCTCATAATTCTCAATCAAAGAAACCCTTTGTGACAAGAATTCCTGGTGTGAACAACTTGAATCCTCAAATTATTGGTGGAGCCTCAGAGAAGGAGGGTGCCAGTTGTGGATCTGAGTGCATTAATAAAGCATTCAGCGCTGCAGGAACATCTCAATCTGGCCTGATGAAAGAAAAGCGTGGAACAGTTAGAAAGGTCCATTCTGGTAGCACCAAGAGAGACTACATTCTTCAACACAAGTCATTTCACAAAGAAAAAAGTTATCGTACTTATGGATTAAAAGGGTCTTCAAGACGAGGAAAAGTGAATGGCTTGAGTGGTTTGGTCTTGGATAAAAAACTTAAATCTGTGTCAGAATCTTCTACCATAAACTTAAAGAGTGCATCCTTACAGATAAGTAAGGCAGTGGGCATTGATACTACGCAAGACAGTATTAGTGTTAACTTTTCATGTAATGCTGGGACTTCTACATCCACTGCATTTAGCCTGGTGAATTCTTCTGATTCTGTTTGTAGATCAACCAATACTTCATTTGCAATAAATGCAGCAAATACTATACCCGTATTCAGTTGTCCAGCTTCATTATCAGCTACCAATACAGATCTTTCTCTCTCATTGTCTTCAAAAATCAAGCCTTCTACGGAATCTGTCTGCAGCAATAATGAGGCACCTAATAGTAGTTATATGGGAATACTGTATAATAATAATAATAATAATAAGTCCCCAAGGCAGTGGATACCCCACGATGGAAAGGATGAGATGATTTTAAAACTGCTTCCAAGGGTTCGGGAGCTGCAAAACCAGCTTCAAGAATGGACAGAGTGGGCTAATCAGAAGGTCATGCAAGCTGCTCGTCGTCTGAGTAAGGAAAAGGCTGAGCTTCAGACACTAAGGCAAGAGAAAGAGGAAGTTGAACGTCTAAAAAAAGAGAAGCAATCTCTAGAGGAAAATACCTTGAAGAAGCTTTCTGAGATGGAAAATGCCCTGTGTAAAGTTAGTGGGCAGGTAGAGCGAGCTAATGCCACTGTCCGGAAGCTCGAGGTGGAGAAGGCTGCACTGAGGAAAGAGGTGGAGGCTGCTAAGATACGTGCCACAGAAACTGCTGCAAGCTGTCAAGAGGTCTCAAGGAGAGAAAAGAAGACACAAATGAAGTTTCAGTCATGGGAAAAGCAGAAATCCTTGTTTCAGGAAGAGCTAACGATTGAAAAACGGAAATTGGCACAGCTGCTGCAGGAATTAGAACAAGCTAGAATGCAGCAGGAGCAAGTTGAGGGTAGATGGCAGCAGGAAGCAAAGGCAAAGGAAGAGTTTATCCTGCAGGCCAGTTCTATAAAAAAGGAAAGAGAACAAATTGAGGAATCAGGAAAATCCAAGGAGGATGCGATCAAATTAAAAGCAGAGAGGAATCGGCAAATGTACAGAGATGACATCCATAAACTTGAAAAGGAAATTTCCCAACTAAGACTGAAGACTGACTCTTCAAAAATTGCTGCACTGAGGATGGGCATTGATGGATGCTATGCCAGCAAATGCTTGGACATGAAAAATGGCACTGCTCAGAAGGAACCCCGGGCTTCTTTCATCTCAGAGCTAGTCATTGACCACTCAGCGACAGGTGGTGTGAAACGGGAACAAGAATGTGTGATGTGCCTTTCAGAGGAGATGTCTGTTCTGTTCATGCCATGTGCTCATCAGGTTGTTTGCAAAACATGTAATGAGCTCCATGAGAAGCAGGGTATGCAAGATTGCCCTTCTTGCAGGAGCCCTATCCAACAGCGTATTGCTGTGCGCTTTCCACGTATTTGA 2673 0.4183 MISLVASCSSQMSPSVSCQEKGSRNKRKFRVDPPLGEPNKFIPAPQLKCFSYEFSAERFEITPGHGQAAACDLCGVSQDYSDGLKLGLGLYNPGTSEVGPSQSKDEPETDEINDADWSDLTEAQLEELVLTNLDTILKSAIKKIVACGYTEDVATKAILRPGICYGCKDTLSNIVDNSLAFLRNGQEIDTSREHYFEDLVQLEKYNLAELVCVLREVRPFFSVGDAMWCLLICDMNVSHACAMDCNPLSSLGNDNSTGGPSNQAESLSKAETKCPEPSLISPSKSIPTCSHNSQSKKPFVTRIPGVNNLNPQIIGGASEKEGASCGSECINKAFSAAGTSQSGLMKEKRGTVRKVHSGSTKRDYILQHKSFHKEKSYRTYGLKGSSRRGKVNGLSGLVLDKKLKSVSESSTINLKSASLQISKAVGIDTTQDSISVNFSCNAGTSTSTAFSLVNSSDSVCRSTNTSFAINAANTIPVFSCPASLSATNTDLSLSLSSKIKPSTESVCSNNEAPNSSYMGILYNNNNNNKSPRQWIPHDGKDEMILKLLPRVRELQNQLQEWTEWANQKVMQAARRLSKEKAELQTLRQEKEEVERLKKEKQSLEENTLKKLSEMENALCKVSGQVERANATVRKLEVEKAALRKEVEAAKIRATETAASCQEVSRREKKTQMKFQSWEKQKSLFQEELTIEKRKLAQLLQELEQARMQQEQVEGRWQQEAKAKEEFILQASSIKKEREQIEESGKSKEDAIKLKAERNRQMYRDDIHKLEKEISQLRLKTDSSKIAALRMGIDGCYASKCLDMKNGTAQKEPRASFISELVIDHSATGGVKREQECVMCLSEEMSVLFMPCAHQVVCKTCNELHEKQGMQDCPSCRSPIQQRIAVRFPRI* 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2148 890 PANTHER OS05G0141500 PROTEIN 5 887 - -
Gso7g2148 890 Pfam Zinc finger, C3HC4 type (RING finger) 833 881 - -
Gso7g2148 890 PANTHER OS05G0141500 PROTEIN 5 887 IPR046934 -
Gso7g2148 890 Coils Coil 752 779 - -
Gso7g2148 890 Pfam Family of unknown function (DUF6592) 133 243 IPR046527 -
Gso7g2148 890 SUPERFAMILY RING/U-box 831 883 - -
Gso7g2148 890 Coils Coil 681 719 - -
Gso7g2148 890 ProSiteProfiles Zinc finger RING-type profile. 836 876 IPR001841 -
Gso7g2148 890 Coils Coil 566 613 - -
Gso7g2148 890 Coils Coil 625 652 - -
Gso7g2148 890 MobiDBLite consensus disorder prediction 8 35 - -
Gso7g2148 890 MobiDBLite consensus disorder prediction 254 291 - -
Gso7g2148 890 MobiDBLite consensus disorder prediction 254 269 - -
Gso7g2148 890 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 825 886 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2148 Gso-Chr7 45282679 45287665 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2148 - - gsj:114420104 1705.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2148 7 45282679 45287665 Gso17g0161 17 1512679 1517134 GST
Gso7g2148 7 45282679 45287665 Gso15g0848 15 7806615 7810880 PCT
Gso7g2148 7 45282679 45287665 Gso11g2416 11 40186177 40190464 PCT
Gso15g0848 15 7806615 7810880 Gso7g2148 7 45282679 45287665 PCT
Gso11g2416 11 40186177 40190464 Gso7g2148 7 45282679 45287665 PCT