Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2113 ATGTTGAATTGGCACAAGCACAGTCACAGAGCCCTTCTCCATCTGAAGACCTCGGCACCAAGATCTCAACATCAACATCATCCTCTTATCAAATTCTGCAGCACCATTTCGGACTCCTTCACAGTCTCCTACCTCATCACCCGCTTCGGCTTCTCCCCAGAGACCGCCCTCAGCATCTCCCGCAAGTTCCGCCTCGACAGCCCCCACAGGCCCGACTCCGTTCTCGCCTTCTTGGCCACCCACGGCTTCTCTCCTTTCCAAATCCGCCAAGTCATCCAAGGCCAACACACCATCCTCCTCTGCGACCCCAACAACCTCATCCTCCCCAAATTCCAGTTCCTCCGCTCCAAAGGCGCCTCCACCTCCCACATCATCCGCATCGCCACCGCTTCCCCCACCTTCCTCTCCCGCTCCCTCGACAGCCACATCGTCCCCGCCTACCAATTCCTCCGAACCTTCCTCGTCTCCGACGAACTCATCATCCGATGTCTCAGCCGCGACTCCTCCGTCTTTTTCTCCGACGACCCCCGCTTCCCTCTTACCGCCGAATTCCTCCTCGATAACGGCTTCACGCGTTCCGCCGTTGCCAGGCTGCTGCACATGTGTCCCTCTGTTCTCTGCTCACGTGACTTACCCGACACGGTGCATGCACTCAAGCAATTAGGGTTTGATACCTCCGCCCCCAATTTCAGTGCTGCGTTGGTCGCGAAAAGCACAGTGAATAAAACCAACTGGGGTGAGTCGGTTAGGGTTTTCAAGAAGTGGGGTTGGTCCCAGGAACACGTTCTTATGGCGTTTAAGAAGCATCCTTCTTGTATGCTGACGGAACCTGATGAGATAGATGCTGTGTTCAGTTATTGGGTTAAGGAGTTAGGTGGGAGTTCTTTGGAGCTTGTCAAGTATCCTGTTATTTTTCGGTTGAGCCTTAAGAAGTGGATTGCTCCCAGGGCTTCCGTCGTTCGGTTTCTTGCAGCGCAAGGTCTATTGGAAAGGAGTGGCAACATGGTCACGCTGTTTATTATGTCTGAGAAAAGATTCCTGGACACGTTTGTGAAACGTTATGAGAAGCATTCGTCTCAGTTGTTGAAGATGTATAAGGAAAGTGTGAATATGAATGTTGCCAATAGCAAGGAGAACAAGAAGAAAACTTGCTTGTAG 1158 0.5242 MLNWHKHSHRALLHLKTSAPRSQHQHHPLIKFCSTISDSFTVSYLITRFGFSPETALSISRKFRLDSPHRPDSVLAFLATHGFSPFQIRQVIQGQHTILLCDPNNLILPKFQFLRSKGASTSHIIRIATASPTFLSRSLDSHIVPAYQFLRTFLVSDELIIRCLSRDSSVFFSDDPRFPLTAEFLLDNGFTRSAVARLLHMCPSVLCSRDLPDTVHALKQLGFDTSAPNFSAALVAKSTVNKTNWGESVRVFKKWGWSQEHVLMAFKKHPSCMLTEPDEIDAVFSYWVKELGGSSLELVKYPVIFRLSLKKWIAPRASVVRFLAAQGLLERSGNMVTLFIMSEKRFLDTFVKRYEKHSSQLLKMYKESVNMNVANSKENKKKTCL* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2113 385 Pfam mTERF 182 347 IPR003690 GO:0003690|GO:0006355
Gso7g2113 385 Pfam mTERF 75 225 IPR003690 GO:0003690|GO:0006355
Gso7g2113 385 PANTHER CGI-12 PROTEIN-RELATED 31 373 IPR003690 GO:0003690|GO:0006355
Gso7g2113 385 SMART mt_12 295 329 IPR003690 GO:0003690|GO:0006355
Gso7g2113 385 SMART mt_12 196 224 IPR003690 GO:0003690|GO:0006355
Gso7g2113 385 SMART mt_12 125 156 IPR003690 GO:0003690|GO:0006355
Gso7g2113 385 SMART mt_12 263 294 IPR003690 GO:0003690|GO:0006355
Gso7g2113 385 SMART mt_12 161 191 IPR003690 GO:0003690|GO:0006355
Gso7g2113 385 SMART mt_12 89 120 IPR003690 GO:0003690|GO:0006355
Gso7g2113 385 Gene3D Transcription termination factor 3, mitochondrial 130 364 IPR038538 -
Gso7g2113 385 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 31 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2113 Gso-Chr7 44993820 44997308 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso7g2113 mTERF 4.3e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2113 K15032 - gmx:100788877 771.541