Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2108 ATGTTGAAATTTCACATCCACAGAATTCTTGTTTGCGCCAAGGGTTTCACATTCACAACCCTAAAATGGAACCCTATTGTTCAACTCCAATTTCTCAAATTCGAGTTCTGCACTACCTCACGCTCTTTCGTGGTGCCCTACCTCATCAACAATTGTGGCTTCTCCCAAGAAAACGCTCTCAAAGCTTCCCTCAGGCTCCGTTTCCGTGGCCCCCAAAAGCCCGATTCAGTTCTCTCCTTCTTCCGAAGCCACGGCTTCTCCAACTCTCAAATATGCCATATCCTCCAAAAAGCACCCCGGCTACTTTTATGCAACACCCAGAAGACACTGTTGCCAAAGTTCCAATATTTACTTTCAAAAGGTGTTTCTTCCCTTGACATTGTTCGCATGGTCACCCCTGCCCCTCGTTTCCTTGAAAGAAGTTTGGAGAATCATATAATCCCAACATGTGAATTTGTAAGAGGGTTCCTCCAATCTGACAAGCGAATGATTCATCTTCTGATTCGCAGTCCTAAGTTACTTAATGAAAGTAGTGTGACACCTAACATCAAATTGTTGCTTGATAATGGAGTTACCCACTCAAGCATTGCTTTGTTGCTCCAGAGACGGAACCAGTTACTCTGGTCTGCTAACTTGTTGAAGACTGTTGAGGAATTGAAGCAAATGGGTTTCGATCCTTCAACTTCAACTTTCAGTATGGCATTGCTTGCCAAAAGGACTGTAGGGAAAACCAAATGGGCCGAGAAGATTGACACTTTTAAGAAGTGGGGATGGTCCCAAGAACAAGTTCTTCTAGCATTTAGGAGGCAGCCTCAGTGTATGTTGTCATCCCGTGATAAAATTAATGCAGTGATGAGTTTTTGGGTAGAACAGGTGGGTTTCAATTCTGCAGAGATTGTCAAAGCTCCAGGAATTTTTCTATTTAGTCTCCAGAAGAGGATTGCTCCAAGGGCTTTAGTTGTGCAGTTTCTTATCTCAAAAAGTCTGCTACAAAAGGAGGCAAGCTTAACTACACCATTTATTCTGCCTGAGAAGTTGTTCCTTAAAAAGTTTGTAAAACATTTTAAGGAGGATTCTTCTCATCTGTTAAAGCTGTACGAGGAAAAAATGAGTCTTGAAAATGATAGGGGCAACCCTTGTTCGTAG 1146 0.425 MLKFHIHRILVCAKGFTFTTLKWNPIVQLQFLKFEFCTTSRSFVVPYLINNCGFSQENALKASLRLRFRGPQKPDSVLSFFRSHGFSNSQICHILQKAPRLLLCNTQKTLLPKFQYLLSKGVSSLDIVRMVTPAPRFLERSLENHIIPTCEFVRGFLQSDKRMIHLLIRSPKLLNESSVTPNIKLLLDNGVTHSSIALLLQRRNQLLWSANLLKTVEELKQMGFDPSTSTFSMALLAKRTVGKTKWAEKIDTFKKWGWSQEQVLLAFRRQPQCMLSSRDKINAVMSFWVEQVGFNSAEIVKAPGIFLFSLQKRIAPRALVVQFLISKSLLQKEASLTTPFILPEKLFLKKFVKHFKEDSSHLLKLYEEKMSLENDRGNPCS* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2108 381 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 33 374 - -
Gso7g2108 381 SMART mt_12 264 295 IPR003690 GO:0003690|GO:0006355
Gso7g2108 381 SMART mt_12 164 192 IPR003690 GO:0003690|GO:0006355
Gso7g2108 381 SMART mt_12 296 330 IPR003690 GO:0003690|GO:0006355
Gso7g2108 381 SMART mt_12 128 159 IPR003690 GO:0003690|GO:0006355
Gso7g2108 381 SMART mt_12 92 123 IPR003690 GO:0003690|GO:0006355
Gso7g2108 381 Pfam mTERF 243 344 IPR003690 GO:0003690|GO:0006355
Gso7g2108 381 Pfam mTERF 78 225 IPR003690 GO:0003690|GO:0006355
Gso7g2108 381 Gene3D Transcription termination factor 3, mitochondrial 159 364 IPR038538 -
Gso7g2108 381 PANTHER CGI-12 PROTEIN-RELATED 33 374 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2108 Gso-Chr7 44940101 44942352 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso7g2108 mTERF 4.5e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2108 K15032 - gmx:102667698 751.51