Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2097 ATGTATATTGCTTACATTCTTGGGGTTGAAGCTAATGTTGCTGTGCATATTTGGGTAAACATGCTTAATTCTGAAGGAGATTTAAAAATAAGTTTTGGCTATAAATGCAATAGCGATAGAGGTATTCCTTGTGAAGTTGCCAGTGGCTGCAAAATCCTTCCTGGAGTACGTAGAACAAGCAGTTTCTCCTGCTTTTCAGGTGCAGCCTTAAGTGCAAATGCTACATTAGCAAACACAAACATCTGCAATGGTAAGATAGGAGAAGAAATCCTTCCAAGTTGGGATTCTCCTAATTCATTTCGAAAAGTAACCTCTTCACCAAGTCTTTCAAAGTTGGACATACTATCATCCTCCCTCCCAAATAGTCTGTCTTACCTTAGCTGCAGTCCTTCTACTACAAGTGATATCCTTGAATATGACTCTTGCACATTAAAATCCATGAGTGATCCTTCCAGAAGTGAAGGTTTTCTTAATGCTAAGGAAGTCCAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTCTTCTGTGCAATATATGACGGCTTTAATGGAAGAGATGCAGCTGACTTTCTGGCTGGTACCCTGTATGACACCATCATATCTTACTTTAACAAGTTAATTTGGGAATTGGAGCCGGGTTCCGTCAAAGCTTACGATGATGGATGCTTGGGTGGATCCCTGCAATATAAGTTGGATGATAGTCTTATTTATCACGAGGATCAATCTCTGTCAAGATTTAAGGGAATAAACGATTCTAATCATGGTTGTTTTGCAAAGTGTAGTCCATCTACTAAGTCAGAAGTATCATGTGATTCATTTTCATATGGGGTACTTGATATCCTTGAACGTTCTATTAGTCAGGCTGAGAATGACTTCTTGTACATGGTTGAGCAGGAAATGGAGGAACGTCCTGATTTAGTTTCTATTGGATCTTGTGTTTTACTTGTGCTTCTTCACGGCAATGATTTGTATACCCTTAATCTAGGTGACAGCAGAGCAGTATTGGCAACATGCACTACAGTTGATCGAATGGATAAGAGAGAGAGACTCGAGGCTATACAGCTTACAGATAATCATACTGTTGATAATGAAGTTGAAAGAGCTAGACTTCTGGCTGATCATCCTGATGATCCCAAGATCGTTATAGGAGGAAAAGTGAAAGGTAAATTGAAGGTTACTCGAGCTTTTGGAGTTGGCTACTTGAAAAAGAAAAATCTGAATGATGCTTTGATGGGAATCCTTCGAGTTCGGGATCTTAAAAGCCCACCATACATATCCACGCAACCATCATTGAATGTCCATAGAATTTCAAATTCCGATCAATTTGTTATAGTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAGGCAGTAAAGCTTGTGGAGTCTTATATCTTGAGCAATCCTTTTGGTGATCCAGCAAAGTTTCTCATAGAGCAGCTTGTAGCTAGAGCAGCTGATTCTGCCGGTCTTAGCATGGAAGAGTTGATGAATATTCCAGCTGGGAGGAGAAGGAAGTACCATGACGACGTGACCGTAATTGTAATCATGCTTGGGATGAATCAGCGTACTTCAAAGGCATCAACTTGCATTTAA 1635 0.4018 MYIAYILGVEANVAVHIWVNMLNSEGDLKISFGYKCNSDRGIPCEVASGCKILPGVRRTSSFSCFSGAALSANATLANTNICNGKIGEEILPSWDSPNSFRKVTSSPSLSKLDILSSSLPNSLSYLSCSPSTTSDILEYDSCTLKSMSDPSRSEGFLNAKEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISYFNKLIWELEPGSVKAYDDGCLGGSLQYKLDDSLIYHEDQSLSRFKGINDSNHGCFAKCSPSTKSEVSCDSFSYGVLDILERSISQAENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSRAVLATCTTVDRMDKRERLEAIQLTDNHTVDNEVERARLLADHPDDPKIVIGGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVRDLKSPPYISTQPSLNVHRISNSDQFVIVGSDGLFDFFSNDEAVKLVESYILSNPFGDPAKFLIEQLVARAADSAGLSMEELMNIPAGRRRKYHDDVTVIVIMLGMNQRTSKASTCI* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2097 544 ProSiteProfiles PPM-type phosphatase domain profile. 156 531 IPR001932 -
Gso7g2097 544 Pfam Protein phosphatase 2C 303 495 IPR001932 -
Gso7g2097 544 SMART PP2C_4 147 529 IPR001932 -
Gso7g2097 544 PANTHER PROTEIN PHOSPHATASE 2C 20 543 IPR015655 GO:0004722|GO:0006470
Gso7g2097 544 SUPERFAMILY PP2C-like 170 532 IPR036457 -
Gso7g2097 544 PANTHER PROTEIN PHOSPHATASE 2C 40-RELATED 20 543 - -
Gso7g2097 544 Gene3D - 126 540 IPR036457 -
Gso7g2097 544 CDD PP2Cc 169 529 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2097 Gso-Chr7 44842069 44845675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2097 26 544 PP2C-type Phosphatase Gene Family AT3G16560 62.476 0.0 597
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2097 - - gmx:100808304 1050.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2097 7 44842069 44845675 Gso17g0205 17 1915763 1919304 GST
Gso7g2097 7 44842069 44845675 Gso9g0390 9 3800431 3804333 PCT
Gso9g0390 9 3800431 3804333 Gso7g2097 7 44842069 44845675 PCT