Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2093 ATGGTACTACGTTGTCACGTTTTTTCGAATTGTGGTTCTTTTGTGGAATTTGAACTGATGTTATTGTTAAAGCACGTACGTTGCAACTCTGCCACTAACAGACTCATAACTGCAAAGGACCATGCCTCGGTTCAGATAAACATTGGCCATTTGGATGAGAATGGTATCTATAATGGTCATTTTTCCACTTCTGCTCTCTCTGGCTTCGTTCGAGCACAGGGTGATGCTAACAGTGCATTAGATAGGTTGTGGCAGAAGAAGAAAGCAGAAGTTAAGCAACACTAG 285 0.4175 MVLRCHVFSNCGSFVEFELMLLLKHVRCNSATNRLITAKDHASVQINIGHLDENGIYNGHFSTSALSGFVRAQGDANSALDRLWQKKKAEVKQH* 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2093 94 Pfam Ribosomal protein S21e 29 88 IPR001931 GO:0003735|GO:0005840|GO:0006412
Gso7g2093 94 Gene3D - 11 93 IPR038579 -
Gso7g2093 94 PANTHER 40S RIBOSOMAL PROTEIN S21 22 93 IPR001931 GO:0003735|GO:0005840|GO:0006412
Gso7g2093 94 PANTHER 40S RIBOSOMAL PROTEIN S21 22 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2093 Gso-Chr7 44827020 44828299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2093 30 94 Cytoplasmic Ribosomal Protein Gene Family AT5G27700 76.923 1.79e-33 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2093 K02971 - gmx:100780867 133.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2093 7 44827020 44828299 Gso9g0389 9 3792310 3794061 PCT
Gso9g0389 9 3792310 3794061 Gso7g2093 7 44827020 44828299 PCT