Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2089 ATGAGCATGGAGGAGCCTCAGTACCGCGAACATCCCAAAGCCAAAATCGCCACCATTCCGCCGTCGCAGCACTCCGATGGCGCCGCGGCCGAGTTGCGCGGTGTCGATTGCAACCTGGCTTCCCTCTGCGAGCATGTCCAAATCGAAGGCTTCAATTCCGGTTCCTTCTCTGATATCGTTGTCAATGCTATGGGTTCCACTTATCGCCTTCATCGTCTTATCCTCTCTCGCAGTTCGTATTTCAGGAACATGCTTCATGGGCCTTGGAAAGAAGCCGGTGCTCCTGTTGTGACTCTTCATGTTGATGATAAGAATGTTAATGATGAGGCAATTGCAATGGCTTTGGCATATCTATATGGACACCACCCTAAGCTTAATGATAATAATGCATTTCGTGTTCTTGCTGCTGCTTCCTTTCTTGACCTGCAGGATTTGTGTGGAATTTGTACAGATTTCATTATATCTGAGCTGTGGACTTCAAACTTCTTGGCTTATCAGGTGTTTGCGGAGAACCAAGACTATGGCATTCATGGGGAGCGTGTTAGAACTGCATGCTGGGGCTACCTCTGTCAAAGTGGTGGCATGGAATTGAAAGAGGTGCTTCCTAAACTTTCATCTCAAACATTACATGCATTACTGACTTCTAATGATCTGTGGATACCCAATGAAGAGAAACGGTTTGAATTGGCTTTGCATACATTCCTGGCAAAAAGTGCTAATTGCAAGGTTGAACATCATGCGCATGGAATTTCTGGTACTGAGTCTGCAACCAGTGTCCATGCTGATTCTGGTAGCTCCAAGGGAAAAAGTGTGACTGATAGCTGCACTAGTAAGAGGTTGGAAACTGGCATGGGGAAAATGAGTCTTAAAACTGATCTAGAGGACCCTAGCACACCTAGTCTTCTAGTCAAGCTTGCAGATCCAGTGGCAGACTTCAACGACGGGGTTTCTGTTTCCAATGAACGGGTTCAACAAGCTTCATATGCCAGTTCACCAAACCTGAATCCAAGATATTCTTGTGACATGGAAGGACCGTCATTGAGTAATTCATTGCCTGATACAGATGGGATGAGAACATCGTGTTATGTTGAGATGCCTCTTGGTGCTGGAGCTACTGGTATGGGAGCCACTGAAGTGGGTATTGAAGGGCCATCTGAAGAAGGACCTTGCTACCATTTGGAGAACAATAGTTGGTTAGATAGAGATCAATCAAGACATTGCTTTTCATCGAATTCTTGTAATGAGCTCACATCCAGTGATTGGGGAAGATATGGAACACCTTTATTTTCATGGAATGGCCAGGTTGTTGGCAGAAGACAGCTTAAATCTCACCCCAGAGGAAACTACAGAGGTCATGGAGATGAATATGATGCATTTTTCAATATATTTGAAGGGGGTTCCCTTTTATATTGCAATATGTCTTTTGATGCACTTCTAAATGCCAGAAAGCAACTTGAAGAATTAGGTTTCCCTTGCAAAGCTGTAAATGATGGTCTTTGGCTGCAGATGCTTCTTAGTCAGAGGGTACAAGAAATTGCTGCTGATACATGCAAAGTTTGCTCCCTCATGAGTATGGCTTGCACTTGTCAGAAGCAATTTGCATTTTCACATGGAGCTTCTACCACTGGATCTTACGCACAAGAACATAATCAGAACATTATGCCTGGCAATGCGGGAAATATATATGTTGCTGAATCTTCTGCAGGCGAAAGAAATGGCCTTTTTAGACCTGTACGAGTACATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGCCGTGGAACTACATTTGTTCCAGCATCTGCTTCGCCACCTACACGTTTTGTCTTTTCTCGTGTACCATTTGGTGTTGGCAACAGAAACTATCCTCAGTCTGCAGCCAATGATGATTCAGAGACACGTGCTGACCCAAATGGAGACCTGGCTGGAGATGGCTTGACAGCTTTAGTTGGGCTAAGCCTGGGAGGGAGTAATGGAACAAATGTACATACAGAGCTAACACAAAGGGGATATGAAATGGGCTTGCAAAGCAGCATGTCTGGAACTACTGCTGGAGGTGCAAGTACTGGTGGCATTCCCATGCAGATGTTAGAGACACCGGAACATACCATTGGTATAGAATGGGACAATGTCAACAGTAGTTCCATATCACTGGATTTGAAAACACCTTTAAGCCATTTCCCCCCTTTTCGCTTTGGTGTACGTTTTGAGGATGTGCATAGGCTTGGTGATGGCCAGGTCAAGCATTCTCCAGAAGTTTTCTATGCTGGTTCTTTGTGGAAGGTCAGTGTACAAGCTTTTAATGATGAAGACCCCCAGGGACGGCGAACCCTTGGGTTGTTTCTTCACCGTCGGAAGGCAGAGGTGCATATGTATGTTGACTCGCGGGAAAAGGTGACTGCACGCTACCAGTTGACCGTCCCATCCAAGAGAGAAATGACGGTGTTTGGAAGCTTTAAACAAACAGGCACTCTTCTACCTAAAGCTCCTAAGGGATGGGGATGGCGAACTGCCCTGTTATTTGATGAGCTTGCTGATCTTCTTCAAAACGGTGCCCTAAGGGTCATTGCTGTAGTGCAGCTTGTTTAA 2592 0.4541 MSMEEPQYREHPKAKIATIPPSQHSDGAAAELRGVDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSTYRLHRLILSRSSYFRNMLHGPWKEAGAPVVTLHVDDKNVNDEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCGICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGMELKEVLPKLSSQTLHALLTSNDLWIPNEEKRFELALHTFLAKSANCKVEHHAHGISGTESATSVHADSGSSKGKSVTDSCTSKRLETGMGKMSLKTDLEDPSTPSLLVKLADPVADFNDGVSVSNERVQQASYASSPNLNPRYSCDMEGPSLSNSLPDTDGMRTSCYVEMPLGAGATGMGATEVGIEGPSEEGPCYHLENNSWLDRDQSRHCFSSNSCNELTSSDWGRYGTPLFSWNGQVVGRRQLKSHPRGNYRGHGDEYDAFFNIFEGGSLLYCNMSFDALLNARKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKVCSLMSMACTCQKQFAFSHGASTTGSYAQEHNQNIMPGNAGNIYVAESSAGERNGLFRPVRVHVRGAIDGLAGIGRGTTFVPASASPPTRFVFSRVPFGVGNRNYPQSAANDDSETRADPNGDLAGDGLTALVGLSLGGSNGTNVHTELTQRGYEMGLQSSMSGTTAGGASTGGIPMQMLETPEHTIGIEWDNVNSSSISLDLKTPLSHFPPFRFGVRFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEVHMYVDSREKVTARYQLTVPSKREMTVFGSFKQTGTLLPKAPKGWGWRTALLFDELADLLQNGALRVIAVVQLV* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2089 863 ProSiteProfiles MATH/TRAF domain profile. 730 860 IPR002083 GO:0005515
Gso7g2089 863 ProSiteProfiles BTB domain profile. 57 127 IPR000210 GO:0005515
Gso7g2089 863 SUPERFAMILY POZ domain 51 155 IPR011333 -
Gso7g2089 863 Gene3D Potassium Channel Kv1.1; Chain A 31 190 IPR011333 -
Gso7g2089 863 SMART BTB_4 57 157 IPR000210 GO:0005515
Gso7g2089 863 MobiDBLite consensus disorder prediction 252 277 - -
Gso7g2089 863 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 9 863 - -
Gso7g2089 863 Pfam BTB/POZ domain 51 155 IPR000210 GO:0005515
Gso7g2089 863 MobiDBLite consensus disorder prediction 1 23 - -
Gso7g2089 863 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 9 863 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2089 Gso-Chr7 44793484 44799471 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Gso7g2089 BTB 1.9e-13 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2089 - - gmx:100806711 1746.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2089 7 44793484 44799471 Gso17g0213 17 1976582 1982242 GST