Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2075 ATGGCGACTGGATTCGACACCGCCCATGAGAAGAAGAAGAAGATTGCCGTTCTGAGCGTGTCTTCCATCCTCCTGGTGGCGATGGTGGTTGCGGCGGCCGTCGGCATAAGAGACGGCGCCGAAGTGGTCGAGGAAGGTGGCGACACGATCGCGAAATCTCAAAGGAACCAGCAAGTGATATGCGAATCCGCGGAATACAAAGAAACATGCCACAAGAGTCTGGCCAAAGCCTCCGGAACCAGCGATCTGAAGGAGCTCATCATAACCGCGTTCAACGCCACGGCCGAAGAGATCGCGAACCAAATCAAAAACTCGACGCTCTACCATGAACTCGCCACCGACCACATGACAAAACAGGCCACGGACATCTGCAAGGAGGTACTAGGTTACGCTGTCGACGACATTCGCCGATCCGTTCACACGTTGGAAAAGTTCGACCTAAACAAGTTGAACGATTACGCCTATGACCTCAAGGTCTGGATCGCGGGTACTCTAGCTCACCAGCAGACATGTTTGGATGGGTTCGAGAACACGAGCAGCGAGGCTGGAAAGACCATGGCTAAGGTTCTGAACGCGTCTTTGGAGCTCAGCAACAACGCGTTGGACATAGTCAACGGTGTTTCGAGTCTCTTCAAGGGTCTTAACTTGAGTTCCTTCAGCGTCAACAGCAACAGGAAGCTTCTCTCGGAGGAAACGGCTTTGGTGGATGGGTTCCCTACGTGGGTGAGTGAAGGACAGAGGAGGCTTCTTCAGGCTGTGGACCCCAAACCCGACGTGGTTGTGGCTCAGGATGGGAGTGGACAGGTGAAGACAATCCACGAGGCTCTTAAATTGGTTCCTAAGAAGAACAAGAAGCCTTTTGTGATTTACATCAAGGCCGGTATCTACAATGAGTATATTATCATGAACAAGCACTTGACCTATGTCACCATGATCGGAGATGGCCCCACCAAGACCAGAATCACCGGCAGCAAAAACTACGTCGATGGCGTCCAAACTTACAACACCGCAACCTTCGGTGTGAACGCTGCTAACTTCATGGCGAAGAACATTGGGTTCGAGAACACAGCTGGAGCTGAGAAGCACCAAGCCGTGGCCCTGAGGGTAACAGCAGACAAGGCAGTGTTCTACAACTGCAACATGGACGGGTTCCAGGACACCCTCTACACGCAATCCCAGCGTCAGTTCTACCGCGACTGTACCGTGACGGGCACCATCGACTTCGTGTTCGGCGACGCCGTGGCGGTGTTCCAGAACTGCAAGTTCATCGTGAGGATGCCCCTGGAAAACCAGCAATGCCTGGTCACCGCCGGTGGAAGGTCCAAGATCGATAGCCCCAGCGCACTCGTCTTCCAGAGCTGCGTATTCACCGGCGAACCCAACGTGCTTGCCTTGACCCCCAAGATTGCTTACTTGGGAAGACCATGGAGGCTTTACGCCAAGGTTGTCATCATGGACTCCCAAATCGACGACATCTTTGTTCCCGAAGGGTACATGGCGTGGATGGGAAGTGCTTTCAAGGACACAAGCACCTACTACGAGTTCAACAACAGGGGTCCTGGTGCTAACACTATTGGTAGAATCACCTGGCCTGGTTTTAAGGTTCTTAATCCTATTGAGGCTGTTGAATACTACCCAGGCAAATTCTTTCAGATCGCTAATTCGACTGAGCGTGATTCTTGGATCCTAGGGTCTGGGGTGCCCTATTCCCTTGGCCCACTTATTGCGCTGCCATTCCCAACAGCTTAA 1749 0.5277 MATGFDTAHEKKKKIAVLSVSSILLVAMVVAAAVGIRDGAEVVEEGGDTIAKSQRNQQVICESAEYKETCHKSLAKASGTSDLKELIITAFNATAEEIANQIKNSTLYHELATDHMTKQATDICKEVLGYAVDDIRRSVHTLEKFDLNKLNDYAYDLKVWIAGTLAHQQTCLDGFENTSSEAGKTMAKVLNASLELSNNALDIVNGVSSLFKGLNLSSFSVNSNRKLLSEETALVDGFPTWVSEGQRRLLQAVDPKPDVVVAQDGSGQVKTIHEALKLVPKKNKKPFVIYIKAGIYNEYIIMNKHLTYVTMIGDGPTKTRITGSKNYVDGVQTYNTATFGVNAANFMAKNIGFENTAGAEKHQAVALRVTADKAVFYNCNMDGFQDTLYTQSQRQFYRDCTVTGTIDFVFGDAVAVFQNCKFIVRMPLENQQCLVTAGGRSKIDSPSALVFQSCVFTGEPNVLALTPKIAYLGRPWRLYAKVVIMDSQIDDIFVPEGYMAWMGSAFKDTSTYYEFNNRGPGANTIGRITWPGFKVLNPIEAVEYYPGKFFQIANSTERDSWILGSGVPYSLGPLIALPFPTA* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2075 582 Pfam Plant invertase/pectin methylesterase inhibitor 60 203 IPR006501 GO:0004857
Gso7g2075 582 PANTHER PECTINESTERASE 8 576 - -
Gso7g2075 582 SUPERFAMILY Pectin lyase-like 255 569 IPR011050 -
Gso7g2075 582 CDD PMEI-like_3 60 209 - -
Gso7g2075 582 Pfam Pectinesterase 258 550 IPR000070 GO:0030599|GO:0042545
Gso7g2075 582 ProSitePatterns Pectinesterase signature 2. 402 411 IPR033131 -
Gso7g2075 582 SMART PMEI_2 52 203 IPR006501 GO:0004857
Gso7g2075 582 TIGRFAM PME_inhib: pectinesterase inhibitor domain 58 206 IPR006501 GO:0004857
Gso7g2075 582 PANTHER PECTINESTERASE 8 576 - -
Gso7g2075 582 Gene3D - 256 574 IPR012334 -
Gso7g2075 582 ProSitePatterns Pectinesterase signature 1. 283 302 IPR018040 -
Gso7g2075 582 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 207 IPR035513 -
Gso7g2075 582 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 60 206 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2075 Gso-Chr7 44650040 44652727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2075 1 578 Carbohydrate Esterase AT3G05610 44.576 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2075 K01051 - gmx:100820068 1138.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2075 7 44650040 44652727 Gso17g0228 17 2117724 2120475 GST
Gso7g2075 7 44650040 44652727 Gso9g0359 9 3536749 3539518 PCT
Gso9g0359 9 3536749 3539518 Gso7g2075 7 44650040 44652727 PCT