Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2066 ATGGGGAGAATGGGACAAGAATCAGACTCCAAGACCAAGTTGGTATTAGAGATTTGTTCCATTTCCACGCGTTCTGTGCTCTGTGTTCATCATACACTTCTCTCAAAACCAACCTTCGTTGATTGGTACTGCATTCTTGGAGTGGAAGAAAATGCAGGGGTGAATGCCATTCGCAAGAGGTACCATAAACTGGCCTTACAAGTTCACCCAGATAAGAATAAACACCCCAAGGCTGAAATTGCTTTCAAGCTCGTTTCTGAGGCATACGCATGTCTATCTAATGCAGCAAATAGAAAAGCCTTTGACTTGGAGAGATGTAAGCATTTCTGCTTCGAGTGCAAAAGAATACCTTATACATCGAGCAATGTCCCTGGCAATTCAAGTGGGCCAGGTTTCAAGGCATGGAATATCATCACCAGATCAAGATCTTTTAAACTTTGGAGAAACATTAGGGACATGAGAGAAAGATTCATGGACGAGGCCAAGGTGATAGAGAACTGTTTGCGAACAAATTCAATGTCAAGGAAAGCATCTCCATCTTACGATCCGGTTGGCTTTCTACATAGAAGCAAGTCATTGCATAGATTCGAGAAAGAAACCCCAGTTTTCAACCCATCGGACTACTTGCACCAAGGCTACCCTCATCTCAGGAGCAATATTTACAAGAATTCTTCAACATTTTGGTACTTGCAGAGAAATAGTATGCTTCACAATGAAAAGGGAGGAGCGCTGCACGCCTCCCGTTTTTGA 750 0.4293 MGRMGQESDSKTKLVLEICSISTRSVLCVHHTLLSKPTFVDWYCILGVEENAGVNAIRKRYHKLALQVHPDKNKHPKAEIAFKLVSEAYACLSNAANRKAFDLERCKHFCFECKRIPYTSSNVPGNSSGPGFKAWNIITRSRSFKLWRNIRDMRERFMDEAKVIENCLRTNSMSRKASPSYDPVGFLHRSKSLHRFEKETPVFNPSDYLHQGYPHLRSNIYKNSSTFWYLQRNSMLHNEKGGALHASRF* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2066 249 SUPERFAMILY Chaperone J-domain 29 104 IPR036869 -
Gso7g2066 249 ProSiteProfiles dnaJ domain profile. 41 105 IPR001623 -
Gso7g2066 249 PANTHER BNAC03G44070D PROTEIN 6 239 - -
Gso7g2066 249 Pfam DnaJ domain 41 102 IPR001623 -
Gso7g2066 249 ProSitePatterns Nt-dnaJ domain signature. 82 101 IPR018253 -
Gso7g2066 249 CDD DnaJ 41 94 IPR001623 -
Gso7g2066 249 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 6 239 - -
Gso7g2066 249 Gene3D DnaJ domain 40 163 IPR036869 -
Gso7g2066 249 PRINTS DnaJ domain signature 43 61 IPR001623 -
Gso7g2066 249 PRINTS DnaJ domain signature 61 76 IPR001623 -
Gso7g2066 249 PRINTS DnaJ domain signature 77 97 IPR001623 -
Gso7g2066 249 SMART dnaj_3 40 97 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2066 Gso-Chr7 44593640 44595017 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2066 11 102 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.314 2.59e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2066 - - gmx:100816858 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2066 7 44593640 44595017 Gso17g0235 17 2164170 2165679 GST
Gso7g2066 7 44593640 44595017 Gso15g1219 15 12179441 12181001 PCT
Gso7g2066 7 44593640 44595017 Gso9g0350 9 3383323 3384942 PCT
Gso15g1219 15 12179441 12181001 Gso7g2066 7 44593640 44595017 PCT
Gso9g0350 9 3383323 3384942 Gso7g2066 7 44593640 44595017 PCT