Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2054 ATGCTCCTCCGAAGCCACTGTTGCTACTACCTTACCATCATCACCGCGCTGGCAGTGTTCCTTGCAACGACGTCGTTCGCCGACGCCCAATCCTGCAACGGCATCCTCGTCTCCTACGCCCACACCGGCGGCGTGCGGCTGCCGCCGAATGTCTCCGACCCGGCAAAGCAGCCTTACCGGTTCGAGTCGACGGTGACGGTACTCAACAACGGCCTCGACGAGCTCAAGTCGTGGAAGGTCTTCGTTGGGTTCGACCACGACGAGTTGTTGGTCTCCGCCTCCAATGCTGTGCTCGCCGACGGCACCACCCTCCCCGCCGCCGTCGGAAACGGCACCGTCTTCGCCGGCTTCCCCATGACCGATCTCAAGACCGCCGTCGAAACCGCCGGCGACTTGACCCAGATGCAGGCTCAGATAGAACTCGTCGGCACCGTGTTCGGGGTGGCGCCGCCCAGTGTTCCGATGCCGAAATCCATCAACCTCGCCAATGATGGATTCCTCTGTCGCAGATCCACCGCTCAAGGGAAGAATGCGAGTAGTGTGTGTTGCACGAGAGATCCCAAATTCAAAACTAACATTACTACGGATGAAGAGTTTCTGCCACGTCAGAGTGGTGATCTTACCATTATGTATGATGTGATCAGAACTTATGATTCAAATTACTGGGCTGAGGTTACTATTGCAAACCATAACCCACTTGGGAGGCTTGACAACTGGAGGTTGAGCTGGGACTGGATGAATGATGAGTTTATTTATTCAATGAAAGGGGCTTATCCTTCTGTTGTGGATGCTTCTGATTGTCTCTTTGGTAAGCAAGGAACATTCTACAGGGATCTTGACTTTGCCCATGTGTTGAATTGTGAGAGGAGGCCAACCATAATTGATCTCCCTCCCACCAAGTTCAATGATTCCGACCTTGGGAAGATTCCCTTTTGCTGCCGGAATGGCACTATTTTGCCTCCATCGATGGATCCTAGCATGTCTGCTTCGAGATTCCAAATGCAGGTCTTCAAGATGCCACCAGCGCTTAACCGATCCCAGCTTTTGCCCCCGCAGAACTGGAACATAAGTGGCACACTCAACCCTGACTATAAATGTGGCCCTCCTGTAAGAGTGAGTCCTACTGAAAATCCTGACCCATCCGGCTTACCATCAAACAAAACTGTGATGGCCAGTTGGCAGATTGTGTGCAACATAACAACAGCCAAGAGAACATCAAGTAAATGCTGTGTCTCGTTTTCATCTTATTACAATGATTCAGTTATTCCGTGCAAAACATGTGCTTGTGGATGCCCCAAGAACGCAGAGAGAACATGTAGTACTACTGCTCCAGCTATGTGGCTTCCACCAGAGGCACTTCTTGTTCCTTTTGAGAACCGAACCGCCAAGGCTGTTGCTTGGGCAAGTCTGAAACATCTCCGGGTGCCAAACCCAATGCCATGTAGTGATAACTGTGGTGTGAGCATCAACTGGCATTTGTACACAGACTACACCAAAGGATGGAGTGCAAGGGTCACCCTTTTTAACTGGGGAGAGACTAATTTTGCAGACTGGTTTGCCGCTGTGCAAATGGACAAAGCAGCTGCAGGTTTTGAGAAAATGTATTCATTCAATGCAACTCTTCTAGATGGTGTAAACAATACAATAATCATGCAAGGTTTGCCAGGATTGAACTACCTTGTAGCAGAAACAGATGCAGCTGATCCTCTGAGAGATCCTAGGGTGCCTGGTAAGCAACAATCAGTGATCTCGTTCACAAAGAAAACTACTCCTGGAATCAATGTAGCTCATGGAGATGGGTTTCCCACTAAGGTATTTTTCAATGGGGAAGAATGCTCTCTTCCTTCAGTGTATCCAAGCAGTAGTGGTTTCAGGGATGGTTTTTCATTGGCTACTCCCTTGCTTCTAACACTGTTGATGATCCTCTTGTAG 1932 0.4974 MLLRSHCCYYLTIITALAVFLATTSFADAQSCNGILVSYAHTGGVRLPPNVSDPAKQPYRFESTVTVLNNGLDELKSWKVFVGFDHDELLVSASNAVLADGTTLPAAVGNGTVFAGFPMTDLKTAVETAGDLTQMQAQIELVGTVFGVAPPSVPMPKSINLANDGFLCRRSTAQGKNASSVCCTRDPKFKTNITTDEEFLPRQSGDLTIMYDVIRTYDSNYWAEVTIANHNPLGRLDNWRLSWDWMNDEFIYSMKGAYPSVVDASDCLFGKQGTFYRDLDFAHVLNCERRPTIIDLPPTKFNDSDLGKIPFCCRNGTILPPSMDPSMSASRFQMQVFKMPPALNRSQLLPPQNWNISGTLNPDYKCGPPVRVSPTENPDPSGLPSNKTVMASWQIVCNITTAKRTSSKCCVSFSSYYNDSVIPCKTCACGCPKNAERTCSTTAPAMWLPPEALLVPFENRTAKAVAWASLKHLRVPNPMPCSDNCGVSINWHLYTDYTKGWSARVTLFNWGETNFADWFAAVQMDKAAAGFEKMYSFNATLLDGVNNTIIMQGLPGLNYLVAETDAADPLRDPRVPGKQQSVISFTKKTTPGINVAHGDGFPTKVFFNGEECSLPSVYPSSSGFRDGFSLATPLLLTLLMILL* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2054 643 PANTHER COBRA-LIKE PROTEIN 7 3 643 - -
Gso7g2054 643 PANTHER COBRA-LIKE PROTEIN 7 3 643 - -
Gso7g2054 643 Pfam COBRA-like protein 221 400 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2054 Gso-Chr7 44497036 44499942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2054 32 630 COBRA Gene Family AT4G16120 69.154 0.0 886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2054 - - gmx:100814396 1314.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2054 7 44497036 44499942 Gso17g0247 17 2247787 2250278 GST
Gso7g2054 7 44497036 44499942 Gso9g0337 9 3277175 3279992 PCT
Gso9g0337 9 3277175 3279992 Gso7g2054 7 44497036 44499942 PCT