Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2052 ATGGTGGATCCAACTGGAAAAGGATCGGAGATTGAAGTCGAGGACTCAAACTCAAACCCTAACGCTCCTTCCTCAGGGAACAGTCCAAGCAGCAACAATGAGCAGAAGAAAACCTGCGCCGATTGCGGCACCACCAAGACTCCTCTCTGGAGGGGTGGTCCTGCAGGACCCAAGTCTCTGTGCAACGCGTGCGGGATCAGAAGCAGGAAGAAGAAGAGAGCGATCTTGGGAATAAACAAGGGGAGCAACGAGGACGGAAGGAAAGGAAAGAGGACCGGCGGCGCTTTGGGGAAGGAGGTGTTGTTGCACCGATCGCATTGGAAGAAGCTCGGAGAGGAAGAGAAAGCTGCGGTCTTGTTGATGTCGCTCTCTTATGGATCCGTTTATGCCTGA 393 0.5369 MVDPTGKGSEIEVEDSNSNPNAPSSGNSPSSNNEQKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKKRAILGINKGSNEDGRKGKRTGGALGKEVLLHRSHWKKLGEEEKAAVLLMSLSYGSVYA* 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2052 130 MobiDBLite consensus disorder prediction 1 56 - -
Gso7g2052 130 ProSitePatterns GATA-type zinc finger domain. 39 64 IPR000679 GO:0006355|GO:0043565
Gso7g2052 130 SMART GATA_3 33 83 IPR000679 GO:0006355|GO:0043565
Gso7g2052 130 PANTHER OS01G0976800 PROTEIN 95 130 - -
Gso7g2052 130 PANTHER OS01G0976800 PROTEIN 1 91 - -
Gso7g2052 130 Pfam GATA zinc finger 39 73 IPR000679 GO:0006355|GO:0043565
Gso7g2052 130 Gene3D - 33 94 IPR013088 GO:0006355|GO:0008270
Gso7g2052 130 MobiDBLite consensus disorder prediction 11 42 - -
Gso7g2052 130 CDD ZnF_GATA 38 73 IPR000679 GO:0006355|GO:0043565
Gso7g2052 130 ProSiteProfiles GATA-type zinc finger domain profile. 33 69 IPR000679 GO:0006355|GO:0043565
Gso7g2052 130 PANTHER OS01G0976800 PROTEIN 95 130 - -
Gso7g2052 130 PANTHER OS01G0976800 PROTEIN 1 91 - -
Gso7g2052 130 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 33 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2052 Gso-Chr7 44483101 44484091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2052 30 130 C2C2-Gata Transcription Factor Family AT5G49300 55.085 1.15e-34 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Gso7g2052 GATA 5.4e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2052 - - gmx:100527933 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2052 7 44483101 44484091 Gso17g0249 17 2265220 2266412 GST