Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2050 ATGAAGCTATTTGGTTTCCCCTTGAAGGGTTCGGGTTCCATCAGTATTAGTGAGGACACACCATGTGTCGACGATGGAGGTGGCAAGAAATTCAAGTGCCGCTACTGTCGTCGCCAATTTGCCAATTCTCAAGCACTAGGAGGCCACCAAAATGCGCACAGGAGAGAACGTGCTAAGCTAGCCCAGTTCAAATATCTTCTCCGTCTTCAACAACATGATCAGTACCATCATCATAGGTTCAACCAAGCATCAAATGCTTCACCTAGTGTTAGTGATGCTAGTGCAACAACTAGTGCTGCAGCTTTGTTTCAATTTCATAGTGCAGCTGCTGCAGGGTCATCACATCTTGGGACACTGCTCCTGCAAGTACCAGCTGGTGGCAACGATGTGGATCTCAACCTCAGATTAGCTTGCTCCTCAGAGAACTTGAAGAACTGA 438 0.4726 MKLFGFPLKGSGSISISEDTPCVDDGGGKKFKCRYCRRQFANSQALGGHQNAHRRERAKLAQFKYLLRLQQHDQYHHHRFNQASNASPSVSDASATTSAAALFQFHSAAAAGSSHLGTLLLQVPAGGNDVDLNLRLACSSENLKN* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2050 145 ProSitePatterns Zinc finger C2H2 type domain signature. 33 53 IPR013087 -
Gso7g2050 145 PANTHER ZINC FINGER PROTEIN 8-LIKE 1 139 - -
Gso7g2050 145 SUPERFAMILY beta-beta-alpha zinc fingers 27 58 IPR036236 -
Gso7g2050 145 ProSiteProfiles Zinc finger C2H2 type domain profile. 31 58 IPR013087 -
Gso7g2050 145 PANTHER ZINC FINGER PROTEIN 5 1 139 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2050 Gso-Chr7 44459743 44460180 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2050 1 78 C2H2 Transcription Factor Family AT1G67030 43.373 1.09e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2050 - - gmx:102670392 270.011
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2050 7 44459743 44460180 Gso17g0252 17 2287793 2288224 GST