Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2049 ATGAGAGTTGAGAAAGAAGGAGCAAAAAATGAAGGCAGATACGTTGGTGGTTTCTTCTACTTGTTTGACTGGACCTCAAAATCTCGTAAGAAATTATTTGCAGCCAAGTCAGATTTGCCAGAGTCCTCGAAACAGAGAAGAAAAGTTGATGGCAACATGGCAATGATGCTGCCCTATCTGGTGGATGATGATGAAATTGGAGTAGGGAAATGTATTAGAGAAAGTAGTGATCATATTTGTGCTTCATCTGTTATAGATGATGAATCTTGTGGAACAAGGGCCCCTGGTGTGATTGGCAGGCTTATGGGGTTAGATTCATTGCCCTCTTCCAGTTTTCCAGATCCTTGTTCTACCCCATACTTTGACAGCCAATCTCTTCAAGATGTGCAGTACTGGAGAACAGAATTTAATCATCTGCATGACCATCAGATCCTGTATTCTGGAAAGCTGATTGAAAAAGCTGAGGGATCTTCTTGGAAATTCATGGAGGCAAAGCCTCAACAGACCCGTAGCAGGCCGATTGAAAAGTTTCAAACAGAAGTAATGCCTCCCAAATCAGCTAAATCTATTCCTCTAACACACCATAAACTTTTGTCCCCAATTAAGAGCCCTGGCTTTGTTCCAGCAAATAATGCTACTTATATAATGGAGGCTGCTGCAAGAATTATTGAACCTGGCCCCCAAGCTACTACAAAGGATAAAACACCTCTGGTAGCATCATCAACTGTATCATTGAGGGTTAGAGATCTTAAAGAAAAACTGGAAGCCTCACAAAAAGGACCTCTAATTGGGTCATCTTCGCTGACTTCTAGAGTTAGAGATCTAAAAGAAAAAAGAGAAACTTCTCATAGAACTAGCAGGCTTTTGGAACCTTCTCAAAGGTCGGCTGAGTCTAATGATGCCAAGTATCTAAAGGGACAATCTTTCAACATAAGTTGGAATGGATCTGTGGATACACAAGTCAGATCATCTTCTCAAGCAGAAGAAGATTCTTCTTTGAAAAATAAAGGGAAGTCTATTTCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGCTTGAGCCTTAGTAGGGGAAAAAGTTTGGTGGAGCAGAAAGAACAATGTGACATTAAAACCCCCCAGCAGCCTCTGAAGGCTAATGTTAAAAAAAAATTGCATAAGAAATCCTCTGGCCAAGATGCTTCTGGTGTTCTCAGGCAGAATAATCTGAAACAGAATTGTTCTACGGATAAAGACAAACTACCATCAAAGCCATTGGTTTCCAATTCGAACAGTAGAAAAGTTGTGACTGGGGATTCCTCTTGTGGACATCATAGAAGCTCTAGTAGTAAATCCATTGCAAAATCTAAAGTTGGGCCCAAAAAATCATCCATGAATGTGACAGATAGTGAAAAGGAAGTTTTGTATACCCGTACCAACAATTTCCCAAGGAAGAAGAGGTCCACAGACAGGGACTGGAATGATAGGGTTGTTGATAATTTGTTTATTGACAAAACTCAGAAGCCTGTTCAGTCTAATCTAGTTAGTAATAAACAACATGATGGGGCTGAAGAAGTCAAAAGTAAAGACATGGATGTAGTTTCCTTCACATTTACCACGCCATTGACAAGATGCAATTCTGGTTTTGAGACATCTGGACAAACTGGCCTGAAGACTAATAGCCTTTCCTTGGATCAGCATATTAGAAGAGTGTTGCTTGACAATGAAACTGATATTACAAGGTTTCCAGTAGGATACAATGCTATTGGTGGTGATTCCTTAGCTATCCTTTTGGATCAGAAGCTGAGGGAATTAACATACGGAGTTGAGAATTCTTGTGATGACTCCGTCAAAGCAAGGTCACCTTCCAGTACTGTACCAAAATCTAAAGATCTGGTTCCCACCCTTAATTCAGTTAACCTCTTTCAACAGTTGCAACAGAAGAAAAACCAAGACATGATGTGTTCAGATAAGTCAGATAAGTTATTCAGTAGCCATGAATGTGACATTTCCTTCACTTGTCTTCCAGAAATATCATCCAAGCACAGACTCTGGGTTGATAAGATGGAGGAGTGTAAGATCAATCCTATGGAAGCAGAGTTATTCAGTCCCAGACAGCCAAGTTCAATGTCTGTTCTTGACCCTTCCTTCTCTACTCAAAGCTGTGAATCTCCATTCAGCACAAATGCTGCTAGTTCAGAAGATCAAAACAGAAGGAAGCAAGTTGTGGGCTCAGGAAGTGGCTTGAATTCCTCATGGAAGTACCATCATGCAGAGGCTGATACAGAATTGTTTGATTCAGCATCAAGTTCGACCGTGCTAAAGAAACAAGCAAGTACAAGGGAGTTAGATTATGTGAATGATATATTGTGTAATGTGGAGTTGATGTACATGGACTTTTCTCTTGGTAGAGCACGTGACATTGTGAACCCTCATCTGTTCAACCAGTTGGAAAGTCGAAGAGGAAGAAGGTTTGAGAGTGATGGTGGTGAGTGTAGGATGAGAAGGAAAATAATATTTGATTGTGTGAGTGAGTGTTTGGACTTAAGATGCAGGCGTTATGTTGGTGGGGGGTACAAAATGTGGGCCAAAGGGGTTGCAATGGTGAGAAGAAATGAATGGTTGGCAAGGAAAGTGTACAAGGAAATTTCAAGTTGGAGGGATATGGGGGATTCAATGGTGGATGAACTCGTAGATAGGGACATGAGCATCGAATATGGGCGATGGCTAGATTTTGAGGTTGATACTTTTCAACTTGGTGCACTGGTTGAAGACCAAATATTTAATTCTTTGGTCGATGACTTCGTTGCTGAAATCCTGCAATTATGA 2817 0.4075 MRVEKEGAKNEGRYVGGFFYLFDWTSKSRKKLFAAKSDLPESSKQRRKVDGNMAMMLPYLVDDDEIGVGKCIRESSDHICASSVIDDESCGTRAPGVIGRLMGLDSLPSSSFPDPCSTPYFDSQSLQDVQYWRTEFNHLHDHQILYSGKLIEKAEGSSWKFMEAKPQQTRSRPIEKFQTEVMPPKSAKSIPLTHHKLLSPIKSPGFVPANNATYIMEAAARIIEPGPQATTKDKTPLVASSTVSLRVRDLKEKLEASQKGPLIGSSSLTSRVRDLKEKRETSHRTSRLLEPSQRSAESNDAKYLKGQSFNISWNGSVDTQVRSSSQAEEDSSLKNKGKSISLAIQAKVNVQRREGLSLSRGKSLVEQKEQCDIKTPQQPLKANVKKKLHKKSSGQDASGVLRQNNLKQNCSTDKDKLPSKPLVSNSNSRKVVTGDSSCGHHRSSSSKSIAKSKVGPKKSSMNVTDSEKEVLYTRTNNFPRKKRSTDRDWNDRVVDNLFIDKTQKPVQSNLVSNKQHDGAEEVKSKDMDVVSFTFTTPLTRCNSGFETSGQTGLKTNSLSLDQHIRRVLLDNETDITRFPVGYNAIGGDSLAILLDQKLRELTYGVENSCDDSVKARSPSSTVPKSKDLVPTLNSVNLFQQLQQKKNQDMMCSDKSDKLFSSHECDISFTCLPEISSKHRLWVDKMEECKINPMEAELFSPRQPSSMSVLDPSFSTQSCESPFSTNAASSEDQNRRKQVVGSGSGLNSSWKYHHAEADTELFDSASSSTVLKKQASTRELDYVNDILCNVELMYMDFSLGRARDIVNPHLFNQLESRRGRRFESDGGECRMRRKIIFDCVSECLDLRCRRYVGGGYKMWAKGVAMVRRNEWLARKVYKEISSWRDMGDSMVDELVDRDMSIEYGRWLDFEVDTFQLGALVEDQIFNSLVDDFVAEILQL* 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2049 938 MobiDBLite consensus disorder prediction 271 287 - -
Gso7g2049 938 MobiDBLite consensus disorder prediction 418 466 - -
Gso7g2049 938 MobiDBLite consensus disorder prediction 396 412 - -
Gso7g2049 938 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 259 936 - -
Gso7g2049 938 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 259 - -
Gso7g2049 938 MobiDBLite consensus disorder prediction 700 745 - -
Gso7g2049 938 PANTHER EXPRESSED PROTEIN 259 936 - -
Gso7g2049 938 PANTHER EXPRESSED PROTEIN 1 259 - -
Gso7g2049 938 MobiDBLite consensus disorder prediction 358 466 - -
Gso7g2049 938 Pfam Domain of unknown function (DUF4378) 778 930 IPR025486 -
Gso7g2049 938 Pfam DUF761-associated sequence motif 82 112 IPR032795 -
Gso7g2049 938 MobiDBLite consensus disorder prediction 256 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2049 Gso-Chr7 44448782 44454967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2049 13 936 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 31.144 6.26e-99 328
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2049 - - gmx:102660038 1818.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2049 7 44448782 44454967 Gso17g0253 17 2294024 2298872 GST
Gso7g2049 7 44448782 44454967 Gso15g1199 15 11920460 11925821 PCT
Gso7g2049 7 44448782 44454967 Gso9g0332 9 3216405 3221905 PCT
Gso15g1199 15 11920460 11925821 Gso7g2049 7 44448782 44454967 PCT
Gso9g0332 9 3216405 3221905 Gso7g2049 7 44448782 44454967 PCT