Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2028 ATGGTTGACACTTTCAGTATAGAGAGCGGGCTTCTTATAAGAGAGTTTGATGAAGATAGAGATGTTAAGGTGGTGGGGAAGCTTGAGAGGAACTGTGAGATTGAGACTAAAAAGGGGGTCTCCATTTTCACCAACATGATGGATGACCCTTTATCTAGGATTAGGTTCTATCCCCTTCATGTTATGTTGGTGGCTGAGCTGCTTGAAAGCAAGGAGCTTGTCGGTGTGGTTCGAGGGTGCATTAAGAGTATGCGAACTCCTACTGAATCATTGCTGAAGATAGGTTGCATATTAGGCCTTAGGGTCTCTCCTACGCACAGGAGAAAGGGGGTTGGACTAAAACTTGTCAACTCAGTAGAAGAATGGATGCTGAGAAATGGGGCTGAATATGCATTCCTAGCAACAGAAAAGAACAATGATGCCTCTATAAACCTATTTACCAACAAATGCAAATATATGAGCCTCAGCTCACTTGTCATATTTGTCCATCCAATAATTAGTTTCCCTGCAAAGCACATTTCCAAGGATATAAAAATTGAGAAGGTGAACATGGACCAGGCAATTTCCTTATACAGAAGAACCCTGAGGGCCAAAGAGTTGTACCCATTAGACATGGATTCTATTTTGAAGGAGAAGCTCAGCTTGGGCACCTGGGTGAGCTATTACAAAGATGAAGGCTGCAGGCTCAACTTGCAGAGGATGGTAGAGAGTGAAGACATAATTACCAATGAAATCACAAGCTCATGGATCATCTTTAGCATATGGAACACTTATGAGGCTTATAAGCTTCAACTTAAAAAGTCTCAGACGACTCTTAGGCTTCTTCACACAACATTAAATCATGCAAGAGACAAAATCTTTCCTTGTCTGAGAATGTCGGTGAGTGAATCACTCTGCACACCCTTTGGATTTCTCTTCCTCTATGGGCTCCATGGAGAGGGAGAGAACCTTGGGGAGCTAATGGAATCCATATGGAGGTTCACATCAAGGTTGGGAGAAAGCTTGAAGGACTGCAGAGTGGTTATAACTGAGTTAGGGTTTGGGGATCCACTTGTAAACCATGTCCCTCAAACAGCTTCTATGTCATGCTTCGATGATATCTGGTACACCAAAAGAATTTCAAGCCATGGTGATGAAAAGGATGATGAACTGCTGATGAAGAGACAAATCGGGAACGTGTTCGTTGACCCTAGAGATTTTTAG 1203 0.4273 MVDTFSIESGLLIREFDEDRDVKVVGKLERNCEIETKKGVSIFTNMMDDPLSRIRFYPLHVMLVAELLESKELVGVVRGCIKSMRTPTESLLKIGCILGLRVSPTHRRKGVGLKLVNSVEEWMLRNGAEYAFLATEKNNDASINLFTNKCKYMSLSSLVIFVHPIISFPAKHISKDIKIEKVNMDQAISLYRRTLRAKELYPLDMDSILKEKLSLGTWVSYYKDEGCRLNLQRMVESEDIITNEITSSWIIFSIWNTYEAYKLQLKKSQTTLRLLHTTLNHARDKIFPCLRMSVSESLCTPFGFLFLYGLHGEGENLGELMESIWRFTSRLGESLKDCRVVITELGFGDPLVNHVPQTASMSCFDDIWYTKRISSHGDEKDDELLMKRQIGNVFVDPRDF* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2028 400 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 236 IPR000182 GO:0016407
Gso7g2028 400 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 3 400 - -
Gso7g2028 400 Pfam Acetyltransferase (GNAT) family 63 150 IPR000182 GO:0016407
Gso7g2028 400 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 147 IPR016181 -
Gso7g2028 400 CDD NAT_SF 62 133 - -
Gso7g2028 400 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 400 - -
Gso7g2028 400 Gene3D - 18 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2028 Gso-Chr7 44293755 44295625 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Gso7g2028 Acetyltransf_1 2.6e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2028 - - gmx:100792925 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2028 7 44293755 44295625 Gso17g0270 17 2443407 2445353 GST
Gso7g2028 7 44293755 44295625 Gso9g0308 9 2947894 2949598 PCT
Gso9g0308 9 2947894 2949598 Gso7g2028 7 44293755 44295625 PCT