Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2017 ATGCTCCAGGCATTGATGAATCTGTTCTCGCTGTGTTGGAAGCCGTTTGGCCGCGATGCTGATCGAATCGATTCCATCGGAGTTATCGGAAGAGAAGGCAAAGACGGCTTGCTCTGGTTCCGCGACTTCGGAAAATATGGCTCCGGTGATTTCTCCATGGCTGTCGTTCAGGCCAACCAGGTTCTCGAAGACCAGAGCCAGATCGAGTCTGGTCCTCTCGGCACCTTCGTCGGCATCTACGACGGTCACGGAGGACCCGACGCCTCAAGATACGTTTGCGATCACTTGTTTCGCCATTTTCAAGCAATATCAGCTGAGTCACGCGGGGTTGTGACAACTGAGACAATCGAAAGAGCATTTCGCCAAACAGAAGAGGGGTACATGGCCCTCGTGTCAGGCTCGTGGAATGCTCGACCTCATATTGCAAGTGCTGGGACCTGTTGTCTAGTTGGAGTGATATTTCAGCAGACACTCTTTGTGGCAAACGCTGGAGATTCCCGTGTTGTATTGGGTAAGAAAGTTGGCAACACTGGAGGTATGGCTGCAATTCAGCTGTCTACAGAACACAATGCAAATCTTGAGGCTGTTAGGCAGGAACTTAAAGAATTACATCCTCATGATCCCCAAATTGTTGTCCTCAAACATGGAGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCTAGATCTATAGGTGATGTATATTTGAAGCATGCACAGTTTAACCGAGAACCACTTAATGCAAAATTCAGACTTCCTGAACCGATGAACATGCCTATCTTGAGTGCTAATCCCACTATTCTTTCTCATGCTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCTGATGGTTTATGGGAGCATTTGAGTAACGAGAAAGCTGTGGATATTGTAAACAGCAATCCACATGCGGGTAGTGCCAAGAGACTTATCAAGGCTGCTCTCCATGAAGCAGCAAGAAAACGAGAAATGCGATATTCAGACCTCCGTAAGATTGACAAGAAAGTTCGACGCCATTTTCATGATGATATATCCGTTATTGTTTTATTCTTAAATCACGACCTTATTTCCAGAGGCACAGTGCTAGACCCGACACTTTCAATTCGAAGCGCTCTCGATCACTGA 1125 0.4631 MLQALMNLFSLCWKPFGRDADRIDSIGVIGREGKDGLLWFRDFGKYGSGDFSMAVVQANQVLEDQSQIESGPLGTFVGIYDGHGGPDASRYVCDHLFRHFQAISAESRGVVTTETIERAFRQTEEGYMALVSGSWNARPHIASAGTCCLVGVIFQQTLFVANAGDSRVVLGKKVGNTGGMAAIQLSTEHNANLEAVRQELKELHPHDPQIVVLKHGVWRVKGIIQVSRSIGDVYLKHAQFNREPLNAKFRLPEPMNMPILSANPTILSHALQPNDSFLIFASDGLWEHLSNEKAVDIVNSNPHAGSAKRLIKAALHEAARKREMRYSDLRKIDKKVRRHFHDDISVIVLFLNHDLISRGTVLDPTLSIRSALDH* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2017 374 PANTHER ALPHABET, ISOFORM E-RELATED 3 374 - -
Gso7g2017 374 ProSitePatterns PPM-type phosphatase domain signature. 76 84 IPR000222 GO:0043169
Gso7g2017 374 Pfam Protein phosphatase 2C 74 321 IPR001932 -
Gso7g2017 374 Gene3D - 43 359 IPR036457 -
Gso7g2017 374 CDD PP2Cc 51 351 IPR001932 -
Gso7g2017 374 SUPERFAMILY PP2C-like 59 352 IPR036457 -
Gso7g2017 374 ProSiteProfiles PPM-type phosphatase domain profile. 50 351 IPR001932 -
Gso7g2017 374 SMART PP2C_4 37 349 IPR001932 -
Gso7g2017 374 PANTHER PROTEIN PHOSPHATASE 2C 42-RELATED 3 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2017 Gso-Chr7 44208921 44213608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2017 1 371 PP2C-type Phosphatase Gene Family AT4G38520 58.268 1.29e-158 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2017 K01102 - gmx:100790813 754.207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2017 7 44208921 44213608 Gso17g0283 17 2522971 2527386 GST
Gso7g2017 7 44208921 44213608 Gso15g1167 15 11436631 11442743 PCT
Gso7g2017 7 44208921 44213608 Gso9g0298 9 2865519 2871163 PCT
Gso15g1167 15 11436631 11442743 Gso7g2017 7 44208921 44213608 PCT
Gso9g0298 9 2865519 2871163 Gso7g2017 7 44208921 44213608 PCT