Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2013 ATGGCATCTGATCCTGAATCGCCAACCTCTCCTTCCGTTGGTTTCAACACCGACCAGCTTCCTCACACCCACACCAGCCGTGCCTCCGAAGACGACGAGGCTTCCGTCGATCCCGATATCGTACGAGACGAAATCGAAGAACAACCCGAGGAAGAAGAAGATGGAGAGGATCTTTACAATGACAACTTTTTGGATGATTATAAGAGAATGGATGAAGCTGACCAGTTCGAATCGTTTGGGCTGGACGACTCGTTGGAAGATGACAGGGATTTTGATCAGATCATGCAGGATCGAAGGGCCGCGGAGATTGAACTCGAGGCACGCGATGGTCGCGCTTCCAATCGTAACAAGCTTCCGCAGCTTCTCCACGACCAGGATACAGATGATGACAATCACAGGTCTTCTAAAAGGGCTCGAGCTGATTTTAGGCCTTCTGCAGCAAGTGATGATGACCTTGATGGTATGCAAAGTTCGCCTGGAAGGTCACAACGAGGGCACTCGAGAGAGGATGTTCTCATGACTGATCAAACTGAGGATGATCGAGATGATGATGATTTTGATGATGGATATGAGATGTATCATGTTCAAGGAACACTTAGAGAGTGGGTTACAAGAGATGAAGTGCGCCGCTTCATAGCCAGGAAATTCAAGGACTTTTTACTCACGTATGTTAATCCAAAAAATGAACATAGGGACAAGGAATACGTGTGGCTGATAAATGAGATGGTGTCAGCTAGTAAGTGCAGTTTGGAGATAGATTATAAACAATTTATCTATGTTCATCCCAACATTGCCATTTGGCTAGCTGATGCCCCTCAATCTGTCTTAGAAGTAATGGAAGATGTTACCAAAAGCGTTGTCTTTGAATTACATCCAAATTACAGGAATATACACCAAAAAATTTATGTTCGCATAACCAACTTGCCAGTTTATGATCAGATTCGAAATATAAGGCAGATCCACTTGAATACAATGATCCGAATTGGGGGAGTAGTAACCAGACGTTCTGGAGTTTTCCCCCAGTTGCAGCAGGTGAAGTATGACTGTAACAAATGTGGAGCAATTTTGGGGCCTTTTTTTCAGAATTCCTATTCAGAGGTGAAAGTGGGATCCTGTCCTGAGTGTCAATCAAAAGGACCATTCACTGTGAATATTGAACAGACAATTTATAGGAATTTTCAGAAGCTTACCCTCCAAGAGAGTCCAGGAATAGTCCCTGCGGGCCGACTTCCAAGATACAAGGAAGTGATACTATTGAATGATCTGATTGATTGTGCTCGTCCTGGAGAAGAAATTGAGGTCACAGGTGTTTATACCAATAATTTTGACTTATCCCTTAACACAAAAAATGGGTTTCCAGTGTTTGCCACTGTTGTTGAGGCAAATTATGTTACGAAAAAGCAAGACCTATTTTCTGCCTACAAACTTACACAGGAAGACATAGAAGAGATTGAAAATTTGGCTAAAGACCCTCGAATTGGAGAAAGGATTGTTAAGTCTATTGCTCCATCAATCTATGGTCACGATGACATAAAAACTGCAATAGCTTTAGCTATATTTGGAGGTCAAGAAAAAAATGTGGAAGGAAAGCATCGCCTGAGGGGAGACATAAATGTTCTTCTTCTCGGTGATCCAGGGACAGCGAAGTCTCAGTTTCTCAAGTATGTTGAAAAAACTGGACAGAGAGCTGTATACACTACTGGTAAAGGGGCTTCTGCCGTGGGTCTTACTGCCGCGGTTCATAAGGATCCAGTCACAAGGGAGTGGACTCTTGAAGGGGGAGCGCTTGTTCTAGCTGACAGAGGAATTTGTCTTATTGATGAGTTTGACAAGATGAATGACCAGGATAGGGTGAGCATCCATGAAGCCATGGAGCAGCAGAGTATAAGCATATCAAAAGCTGGAATTGTTACATCTCTTCAGGCACGCTGTTCTGTTATTGCTGCGGCAAATCCTGTTGGTGGAAGATATGATTCCTCAAAAACATTCTCTCAAAATGTTGAATTGACAGATCCAATTATTTCTCGTTTTGACATCCTCTGTGTAGTGAAGGATGTTGTTGATCCGGTCACTGATGAAATGCTTGCAACGTTTGTCGTTGACAGTCACTTCAAGTCACAACCCAAGGGTGCTAATCAAGATGATAAGTCCTTTAGTGAGTCCCAAGATGTCCATGCATCTGCCATGCCAGCTGATCCAGAGATACTTCCTCAACAGCTACTGAAGAAGTACATTACATATGCCAAGTTAAATATTTTTCCAAGGTTACAAGATGCTGATATGGATAAACTGTCACATGTCTATGCCGAACTACGGAGGGAATCTTCACACGGACAAGGAGTCCCTATTGCTGTAAGGCACATTGAATCAATGATAAGGATGTCTGAAGCTCATGCGAGAATGCATCTCAGGCAACATGTTACACAAGAGGATGTGGACATGGCAATTCGTGTTCTTCTTGAATCATTCATTTCAACTCAAAAATTTGGGGTGCAGAAGGCTCTTCAAAAGAGCTTTAGAAAGTATATGACTTTCAAGAAGGACTACAATGAACTGCTCCTTTATATTCTTCGCGAGCTTGTAAAGAATGCTTTGCATTTTGAAGAAATTGTCACCGGATCTGCTTCTGGTTTAACGCACATAGATGTCAAAGTAGATGATCTCTACAACAAGGCTCAAGAGCATGATATTTATGATCTGAAACCATTCTTCAATAGCAGCCACTTTTCAAGGGCCAATTTTGTATTGGATGAAGAACGGAGAGTGATCAGACATCACCTTACCAGATGA 2790 0.4258 MASDPESPTSPSVGFNTDQLPHTHTSRASEDDEASVDPDIVRDEIEEQPEEEEDGEDLYNDNFLDDYKRMDEADQFESFGLDDSLEDDRDFDQIMQDRRAAEIELEARDGRASNRNKLPQLLHDQDTDDDNHRSSKRARADFRPSAASDDDLDGMQSSPGRSQRGHSREDVLMTDQTEDDRDDDDFDDGYEMYHVQGTLREWVTRDEVRRFIARKFKDFLLTYVNPKNEHRDKEYVWLINEMVSASKCSLEIDYKQFIYVHPNIAIWLADAPQSVLEVMEDVTKSVVFELHPNYRNIHQKIYVRITNLPVYDQIRNIRQIHLNTMIRIGGVVTRRSGVFPQLQQVKYDCNKCGAILGPFFQNSYSEVKVGSCPECQSKGPFTVNIEQTIYRNFQKLTLQESPGIVPAGRLPRYKEVILLNDLIDCARPGEEIEVTGVYTNNFDLSLNTKNGFPVFATVVEANYVTKKQDLFSAYKLTQEDIEEIENLAKDPRIGERIVKSIAPSIYGHDDIKTAIALAIFGGQEKNVEGKHRLRGDINVLLLGDPGTAKSQFLKYVEKTGQRAVYTTGKGASAVGLTAAVHKDPVTREWTLEGGALVLADRGICLIDEFDKMNDQDRVSIHEAMEQQSISISKAGIVTSLQARCSVIAAANPVGGRYDSSKTFSQNVELTDPIISRFDILCVVKDVVDPVTDEMLATFVVDSHFKSQPKGANQDDKSFSESQDVHASAMPADPEILPQQLLKKYITYAKLNIFPRLQDADMDKLSHVYAELRRESSHGQGVPIAVRHIESMIRMSEAHARMHLRQHVTQEDVDMAIRVLLESFISTQKFGVQKALQKSFRKYMTFKKDYNELLLYILRELVKNALHFEEIVTGSASGLTHIDVKVDDLYNKAQEHDIYDLKPFFNSSHFSRANFVLDEERRVIRHHLTR* 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2013 929 MobiDBLite consensus disorder prediction 102 188 - -
Gso7g2013 929 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 132 918 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gso7g2013 929 PRINTS Mini-chromosome maintenance (MCM) protein family signature 534 549 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gso7g2013 929 PRINTS Mini-chromosome maintenance (MCM) protein family signature 594 608 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gso7g2013 929 PRINTS Mini-chromosome maintenance (MCM) protein family signature 622 635 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gso7g2013 929 PRINTS Mini-chromosome maintenance (MCM) protein family signature 646 658 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gso7g2013 929 PRINTS Mini-chromosome maintenance (MCM) protein family signature 673 681 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gso7g2013 929 SMART mcm 310 824 IPR031327 GO:0003677|GO:0005524|GO:0032508
Gso7g2013 929 MobiDBLite consensus disorder prediction 121 148 - -
Gso7g2013 929 Pfam MCM AAA-lid domain 740 823 IPR041562 -
Gso7g2013 929 MobiDBLite consensus disorder prediction 706 728 - -
Gso7g2013 929 Pfam MCM N-terminal domain 214 307 IPR027925 -
Gso7g2013 929 MobiDBLite consensus disorder prediction 1 23 - -
Gso7g2013 929 Pfam MCM P-loop domain 480 703 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gso7g2013 929 PANTHER DNA HELICASE 132 918 - -
Gso7g2013 929 Gene3D - 314 439 IPR012340 -
Gso7g2013 929 Pfam Mini-chromosome maintenance protein 2 31 170 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Gso7g2013 929 MobiDBLite consensus disorder prediction 1 66 - -
Gso7g2013 929 ProSitePatterns MCM family signature. 602 610 IPR018525 GO:0003677|GO:0005524|GO:0006260
Gso7g2013 929 Gene3D - 473 846 IPR027417 -
Gso7g2013 929 MobiDBLite consensus disorder prediction 36 60 - -
Gso7g2013 929 CDD MCM2 496 822 - -
Gso7g2013 929 Gene3D - 206 310 - -
Gso7g2013 929 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 826 IPR027417 -
Gso7g2013 929 Pfam MCM OB domain 313 440 IPR033762 -
Gso7g2013 929 Gene3D - 341 391 - -
Gso7g2013 929 ProSiteProfiles MCM family domain profile. 493 699 IPR001208 GO:0003677|GO:0005524|GO:0032508
Gso7g2013 929 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 323 340 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Gso7g2013 929 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 346 358 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Gso7g2013 929 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 381 395 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Gso7g2013 929 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 442 453 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Gso7g2013 929 PRINTS Mini-chromosome maintenance (MCM) protein 2 signature 457 468 IPR008045 GO:0003677|GO:0005524|GO:0005634|GO:0006270|GO:0042555|GO:1905775
Gso7g2013 929 SUPERFAMILY Nucleic acid-binding proteins 215 462 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2013 Gso-Chr7 44179114 44184451 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2013 14 924 Core DNA Replication Machinery Family AT1G44900 75.490 0.0 1367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2013 K02540 - gmx:100799441 1806.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2013 7 44179114 44184451 Gso17g0288 17 2554635 2560083 GST