Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2012 ATGGCATCCTCGTCCTCTATGATCTCAAACCCGGTTCCGAACACGGACCGGTCACGTGACGCGAAACGGAGGAAGAAGAAAGCGCAGCTGAGGCAGCAGCAACAACGGCAAGAGGATCAGAGCAATCCCAAGTGGAAATCCCAAGCGCAGCAACAAATCTACTCCTCCAAGCTGCGCCAAGCCTTAGCCAGAGTGAATCTCGGGTTGGCGCCGCCGCCGCGCCGAGGCAAAGCCGTGCGCGACGCCGCCGACAGAGTCCTAGCCGTGACAGCCAAGGGGATGACGCGCTGGAGCCGAGCCATCCTCACCAACCGGCTCAAGCTCAAGTTCACCAAACACAAGCGGCAGAGACTTACAACGCCCCCAACCCGGTCAAAGAAACCCCGGGTCAGCGTTTACCGGCTGAAGGGGAAGGGTTCACCGGGCGTGCAGAGAAAAGTGAGGTTCCTCGCACGCTTGGTTCCCGGTTGCCGTAAAGAACCGTTACCGGTTATTTTGGAAGAAGCCATTGATTACATACCCGCGCTTGAGATGCAGGTTCGAGCCATGAGCGCTCTCTTTAACCTTCTATCTGGTTCTTCTTCTTCTTCCGGCGCCGCCGCCTCCCCTTCCGCGCCACCTAGCTCGTCATAG 633 0.5845 MASSSSMISNPVPNTDRSRDAKRRKKKAQLRQQQQRQEDQSNPKWKSQAQQQIYSSKLRQALARVNLGLAPPPRRGKAVRDAADRVLAVTAKGMTRWSRAILTNRLKLKFTKHKRQRLTTPPTRSKKPRVSVYRLKGKGSPGVQRKVRFLARLVPGCRKEPLPVILEEAIDYIPALEMQVRAMSALFNLLSGSSSSSGAAASPSAPPSSS* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2012 210 MobiDBLite consensus disorder prediction 1 15 - -
Gso7g2012 210 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 147 193 IPR036638 GO:0046983
Gso7g2012 210 MobiDBLite consensus disorder prediction 1 53 - -
Gso7g2012 210 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 8 208 IPR044660 GO:0006355
Gso7g2012 210 Coils Coil 18 38 - -
Gso7g2012 210 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 8 208 - -
Gso7g2012 210 MobiDBLite consensus disorder prediction 34 53 - -
Gso7g2012 210 CDD bHLH_AtIBH1_like 134 186 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2012 Gso-Chr7 44169422 44170540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2012 41 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 53.988 6.36e-52 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2012 - - gmx:100798919 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2012 7 44169422 44170540 Gso17g0290 17 2568866 2569871 GST
Gso7g2012 7 44169422 44170540 Gso15g1164 15 11408849 11410016 PCT
Gso7g2012 7 44169422 44170540 Gso9g0296 9 2843820 2845607 PCT
Gso15g1164 15 11408849 11410016 Gso7g2012 7 44169422 44170540 PCT
Gso9g0296 9 2843820 2845607 Gso7g2012 7 44169422 44170540 PCT