Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g2005 ATGGGCTACCAGTGCTATTGCAATTGCGTCTACACTTTCATGTTAAGGAAAAATCCTTCCTTGTATCACGGATATCCTGTTTTCAGCTGGCTTTTAGCGCCAACAGTTCCAGAGTTTCTGTTTTGTTCACACTCTTCTGTAGGCGCATTGTGCCACGCAGCTTCTAGAATTGCTTTGTATCTATCAGCACACGAACTCAGTGCTCCCTTTGACCAGTTACTATCCCTAAATATAATAGCCATGCAATTAGTACTATTGTGTCTACTGATACTCAAGCTCACTCCAGCCTTTGCAACCACCCTGAATGATGCCTATGGTGATGATAGTAGTGGCTGTCCATTAGGGACTGACATATACCAATACACTTGCCCTGAAGCTGAGGCCATTATCTTCTCTTGGGTGGAGCAGGCAGTGTCTCATGACTCAAGAATGGCAGCGTCACTTCTTAGGCTACATTTCCATGATTGCTTTGTCAATGGTTGTGATGGTTCAGTCTTGCTAGATGACACACAGGACTTTGTTGGCGAGAAAACTGCGGGTCCAAATTTGAATTCACTCAGAGGATTCGAAGTAATTGACCAAATCAAATCCGAACTAGAACTAGTCTGTCCACAGACCGTCTCTTGTGCTGACATACTGGCAACTGCTGCCAGAGATTCAGTTCTTCTGTCAGGAGGTCCAATTTGGGAGGTGCAAATGGGAAGGAAAGATGGCATTACTGCTAGCAAGAATGCAGCAAATAATAACATCCCAGGTCCAAACTCCACTGTTGATGTGCTTGTAGCGAAGTTCGAGAATGTAGGCCTTACACTTAAAGATATGGTTGCCCTTTCAGGTGCGCACACAATTGGTAAAGCTCGCTGCAGAACATTTAGCTCGCGTTTTCAGACTAGTAGTAACTCAGAAAGTGCCAATGCTAACATTGAATTCATTGCATCATTGCAACAGCTATGCTCAGGACCAGATAATAGTAACACAGTTGCACATCTTGATTTGGCTACACCTGCTACTTTTGATAATCAATATTTTGTTAATCTTCTATCTGGGGAGGGATTGCTCCCATCAGACCAGGCTCTTGTGAATGGGAATGATCAGACACGACAGATTGTCGAAACCTACGTGGAGAACCCATTAGCTTTCTTTGAGGACTTCAAGCTTTCTATGTTGAAAATGGGAAGCTTGGCATCACCAACTCAGACTAGTGGCCAGATTCGTAGGAACTGCCGAACTATTAACTAA 1239 0.4391 MGYQCYCNCVYTFMLRKNPSLYHGYPVFSWLLAPTVPEFLFCSHSSVGALCHAASRIALYLSAHELSAPFDQLLSLNIIAMQLVLLCLLILKLTPAFATTLNDAYGDDSSGCPLGTDIYQYTCPEAEAIIFSWVEQAVSHDSRMAASLLRLHFHDCFVNGCDGSVLLDDTQDFVGEKTAGPNLNSLRGFEVIDQIKSELELVCPQTVSCADILATAARDSVLLSGGPIWEVQMGRKDGITASKNAANNNIPGPNSTVDVLVAKFENVGLTLKDMVALSGAHTIGKARCRTFSSRFQTSSNSESANANIEFIASLQQLCSGPDNSNTVAHLDLATPATFDNQYFVNLLSGEGLLPSDQALVNGNDQTRQIVETYVENPLAFFEDFKLSMLKMGSLASPTQTSGQIRRNCRTIN* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g2005 412 PANTHER PEROXIDASE 72-RELATED 90 411 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 CDD secretory_peroxidase 114 409 IPR033905 GO:0004601|GO:0042744
Gso7g2005 412 Gene3D Peroxidase, domain 2 251 392 - -
Gso7g2005 412 ProSitePatterns Peroxidases active site signature. 145 156 IPR019794 GO:0004601
Gso7g2005 412 PANTHER PEROXIDASE 40 90 411 - -
Gso7g2005 412 PRINTS Haem peroxidase superfamily signature 145 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 PRINTS Haem peroxidase superfamily signature 207 224 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 PRINTS Haem peroxidase superfamily signature 225 237 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 PRINTS Haem peroxidase superfamily signature 273 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 PRINTS Haem peroxidase superfamily signature 331 346 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 PRINTS Plant peroxidase signature 123 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 PRINTS Plant peroxidase signature 147 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 PRINTS Plant peroxidase signature 187 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 PRINTS Plant peroxidase signature 206 216 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 PRINTS Plant peroxidase signature 225 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 PRINTS Plant peroxidase signature 272 284 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 PRINTS Plant peroxidase signature 329 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 PRINTS Plant peroxidase signature 345 362 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 PRINTS Plant peroxidase signature 386 399 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 Pfam Peroxidase 134 375 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 ProSiteProfiles Plant heme peroxidase family profile. 113 412 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 Gene3D - 119 412 - -
Gso7g2005 412 SUPERFAMILY Heme-dependent peroxidases 114 412 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso7g2005 412 ProSitePatterns Peroxidases proximal heme-ligand signature. 273 283 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g2005 Gso-Chr7 44089490 44094369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g2005 97 412 Peroxidase AT4G16270 61.111 4.12e-139 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g2005 K00430 - gmx:100787637 818.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g2005 7 44089490 44094369 Gso17g0298 17 2665166 2667430 GST