Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1980 ATGGAGTTAACTCCAAGAGGAAGAACCCAAGGCCATGTGTTGACCTTTGAGAGAGATGCAGATTCCTTTGTGGAGGAAGATAAGGAGCTTCAGTCCAAGTGGGCTGCTATAGAGAAACTACCTACTTTCAAAAGGATTAAGACTTCTTTTGTTGATGTCAGTCAGGAGGAGGGTGCAAGCAGCAGCAGCAGCAGCACTGTCATCACGTTGAGAAGCGGCAGCAAAAGGGTGGCTGATGTTTCCAAGCTTGGAGCTGTGGAAAAGCGTTTGTTCATTGACAAGCTCATCAAGCACATTGAGAATGATAACCTCCAACTGCTGCAGAAACTTAGAGAAAGGATGGACAGAGTCAATGTGAAGTTACCTACTGTGGAGGTCAAGTACAAGAACCTGAATGTAAGAGCAGAATGTGAGGTTGTTCAAGGGAAGGCATTGCCAACTCTATGGAACTCTTTTTCTAGCTCACTTTCTGGTTTCATGAAGAATATATCGTGTACTTCTCAAGGGGCAGAGATAAGCATTCTGAATGATGTCAGTGGCATCATAAAGCCATCAAGGCTTACTCTTCTTCTCGGTCCACCAGGGTGTGGGAAAACGACTTTGTTAAAGGCACTGGCTGGAAAATTAGAGCAATCTCTCAAGTTTTCTGGAGAAATCTCTTACAATGGCTACAAGCTAGATGAATTTGTTCCCCAAAAAACATCTGCTTACATAAGCCAATATGACCTGCACGTTCCAGAGATGACAGTGAGAGAAACAATCGACTTTTCAGCACGCTGCCAAGGTGTTGGAGGCAGAGCTGATCTAGTGGCTGAAATCAGCAGGAGAGAAATAGAAGAAGGGATCATCCCTGACCCAGATATTGATACCTATATGAAGGCAATTTCAGTTGAAGGACAAAGCGAAAATCTTCAAACAGAGTATGTTTTAAAGATTCTCGGACTGGATATCTGTGCTGACATACTGGTAGGTGATGCACTAGATAGAGGCATTTCAGGTGGACAGAAGAAAAGGCTAACTACTGGAGAAATGATTGTGGGTCCTATAAAAGCTCTTTTTATGGATGAAATATCAACTGGCTTGGACAGCTCCACAACCTTTCAAATAGTTACATGTCTCCAGCAATTGGTGCACATCACAGATGCAACTGCAGTGCTTTCACTCCTTCAGCCAGCACCAGAAACCTATGAGTTATTTGATGATCTTATATTAATGGCAGAGGGGAAGATAGTATACCATGGCCCCCGAAGCCAAGCACTCCAATTTTTTAAGGATTGTGGTTTCTGGTGCCCAGAAAGAAAAGGAGTGGCAGACTTTCTTCAAGAGGTAATCTCTAAGAAGGATCAAAGGCAATACTGGTACCGCACTGATATTCCTTACAAATATGTTTCAGTGGATGAATTCTCTCAAATATTCAAATCAAGTTATTGGGGGAGAATGTTAAATGATGAGCTCTCACGGCCAGATGATAAATCAGAGTCCCATAAAAATGCTTTATCATTTAGCAAGTACTCCTTGGGAAAATTGGATTTGTTTAAAGCTTGTATGAAGAGAGAGATTCTTCTCATGAAACGGAACTCATTTATCTATGTATTTAAAACTGCACAGCTAACAATCACAGCTATCATAACAATGACAGTCTTCATACGTACTCAGCGGGCTGTGGACTTGATAGGTGCAAACTATTTATTGGGTTCATTGTACTATACACTTGTCCGCCTCATGACTAATGGGGTTGCAGAGTTAATCATGACTATTACTAGACTCCCTGTTGTTGATAAGCAGAAGGAATTCTATCTCTATCCAGCTTGGGCATACTGCCTTCCATCGGCCATTCTAAAGATTCCATTTTCAGTTCTTGATTCTATAGTTTGGACATCAGTAACATATTATGTTATAGGCTACAGCCCTGAAATAACAAGGTTCCTCCGCCAGTTTCTTTTGTTGGTCACTTTGCATATGTCATCAACTTCCATGTGTCGTTGTCTTGCTTCAGTTTTCAAAACTGATGTTGCAGCTACAACTGTTGGTTCCTTGGTCTTAGTACTGATGTTCTTGTTTGGAGGCTTTATTCTTCCTCGGCCATCACTACCACGGTGGTTGAGGTGGGGATTTTGGCTTTCTCCCATGTCATATGGGGAAATAGGAATAACACTAAATGAATTTCTTGCTCCTCGCTGGCAAAAGATCCAAGAGGGAAATATCACTGTAGGGAGGGAGGTTCTTAGGAGTCACGGTTTAGATTTTGACAGCCACTTCTATTGGCTATCAGTTGGAGCCCTACTTGGTTTCACCATACTATTTGATTTTGGATTTGTCTTGGCATTATCATACATAAAACAGCCTAAGATGTCTCGAGCTTTAGTCTCAAAAAAGAGGCTCTCTCAACTAAGGGAACGAGAAACAAGCAATAGTGTGGAACTAAAGTCAGTTACTGTTGATATTGGCCACACACCAAGGGAAAATCAAAGCACAGGGAAAATGGTCTTGCCCTTTGAGCCACTGTCAATAGCATTTAAGGACGTCCAGTATTTTGTTGACATTCCTCCGGAGATGAAAAAACATGGTTCTGATGAGAAAAGGCTACAATTGCTCTGTGATATCACAGGAGCATTTAGGCCAGGAATTCTCACTGCACTGATGGGGGTCAGTGGAGCAGGAAAGACAACTTTGATGGATGTTCTTTCAGGAAGAAAAACTGGAGGTATCATTGAAGGAGATATAAGAATTGGAGGATACCCCAAAGTGCAAAAGACATTTGAAAGAGTTTCAGGTTACTGTGAGCAGAATGACATACATTCTCCATATATAACCGTTGAAGAATCTGTCACATACTCAGCTTGGTTACGGTTGCCAACAGAAATTGATTCTGTCACAAAAGGGAAATTTGTTGAAGAAGTCCTTGAAACAATTGAACTTGATTATATAAAGGATTGTTTAGTTGGCATCCCTGGTCAAAGTGGCTTGTCTACCGAACAGCGTAAAAGACTAACCATTGCAGTGGAGCTGGTTTCCAATCCATCAATAATATTCATGGATGAACCTACATCTAGTTTGGATGCTCGAGCAGCTGCAGTTGTTATGCGTGCAGTGAAGAATGTTGTTGCCACTGGCAGGACGACAGTTTGCACTATACACCAACCAAGCATCGACATATTTGAGACTTTTGATGAGTTGATTCTAATGAAATCTGGAGGACGGATTATTTATAGCGGAATGCTAGGCCATCATTCAAGTAGACTGATTGAATATTTTCAGAATATACCTGGGGTGCCAAAGATCAAGGACAATTATAATCCTGCAACCTGGATGTTGGAAGCTACCTCTGCATCTGTAGAAGCAGAACTTAAAATAGATTTTGCACAAATATATAAAGAGTCCCACCTTTGCCGGGATACCCTTGAATTGGTGAGAGAGTTGAGTGAACCACTGCCAGGTTCAAAAGATTTGCACTTTTCAACTCGCTTCCCACAAAATAGTTTGGGACAGTTCATGGCATGCCTTTGGAAGCAACACTTGTCTTATTGGAGAAGTCCTGAGTACAACTTAACACGTTTCATTTTCATGATTGTTTGTGCAATCATATTTGGAGCAGTATTCTGGCAGAAAGGGAAAAAAATAAACAATCAGCAGGATTTGTTCAACGTACTTGGATCAATGTATATTGCTGTAATATTCTTGGGTCTAAATTACTGTTCAACAATTCTACCATATGTGGCTACTGAGCGTGCTGTCTTGTATCGAGAAAAATTCGCTGGAATGTACTCTTCCACAGCTTATTCATTTGCACAGGTGGTCATTGAAATACCATATATCTTGGTGCAATCAATTTTATATGTGGCTATCACATATCCAATGATAGGTTTCCATTGGTCAGTTCAGAAAGTGTTTTGGTACTTCTACACCACATTCTGTACATTTTTATACTTTGTATATCTTGGAATGATGGTAATGTCGATGAGCTCAAATCTCGATATAGCTTCTGTATTGTCGACTGCAGTCTACACCATATTCAATCTCTTTTCTGGATTCCTCATGCCAGGACCGAAAATTCCTAAATGGTGGATTTGGTGCTACTGGATTTGTCCTACTGCTTGGTCCTTGAATGGCCTCCTAACTTCACAATATGGAGACATAGAGAAGGAGGTACTTGTATTCGGGGAACGAAAATCAGTTGGTTCCTTTTTAAGAGATTACTATGGGTTCCGGCATGACAGATTAAGCCTCGTGGCTGTGGTGCTCATTGTTTACCCAATTGTTTATGCCTCTCTGTTTGCCTATTTCATAAAGAAAATGAATTACCAAAAGAGATAA 4314 0.4101 MELTPRGRTQGHVLTFERDADSFVEEDKELQSKWAAIEKLPTFKRIKTSFVDVSQEEGASSSSSSTVITLRSGSKRVADVSKLGAVEKRLFIDKLIKHIENDNLQLLQKLRERMDRVNVKLPTVEVKYKNLNVRAECEVVQGKALPTLWNSFSSSLSGFMKNISCTSQGAEISILNDVSGIIKPSRLTLLLGPPGCGKTTLLKALAGKLEQSLKFSGEISYNGYKLDEFVPQKTSAYISQYDLHVPEMTVRETIDFSARCQGVGGRADLVAEISRREIEEGIIPDPDIDTYMKAISVEGQSENLQTEYVLKILGLDICADILVGDALDRGISGGQKKRLTTGEMIVGPIKALFMDEISTGLDSSTTFQIVTCLQQLVHITDATAVLSLLQPAPETYELFDDLILMAEGKIVYHGPRSQALQFFKDCGFWCPERKGVADFLQEVISKKDQRQYWYRTDIPYKYVSVDEFSQIFKSSYWGRMLNDELSRPDDKSESHKNALSFSKYSLGKLDLFKACMKREILLMKRNSFIYVFKTAQLTITAIITMTVFIRTQRAVDLIGANYLLGSLYYTLVRLMTNGVAELIMTITRLPVVDKQKEFYLYPAWAYCLPSAILKIPFSVLDSIVWTSVTYYVIGYSPEITRFLRQFLLLVTLHMSSTSMCRCLASVFKTDVAATTVGSLVLVLMFLFGGFILPRPSLPRWLRWGFWLSPMSYGEIGITLNEFLAPRWQKIQEGNITVGREVLRSHGLDFDSHFYWLSVGALLGFTILFDFGFVLALSYIKQPKMSRALVSKKRLSQLRERETSNSVELKSVTVDIGHTPRENQSTGKMVLPFEPLSIAFKDVQYFVDIPPEMKKHGSDEKRLQLLCDITGAFRPGILTALMGVSGAGKTTLMDVLSGRKTGGIIEGDIRIGGYPKVQKTFERVSGYCEQNDIHSPYITVEESVTYSAWLRLPTEIDSVTKGKFVEEVLETIELDYIKDCLVGIPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSSLDARAAAVVMRAVKNVVATGRTTVCTIHQPSIDIFETFDELILMKSGGRIIYSGMLGHHSSRLIEYFQNIPGVPKIKDNYNPATWMLEATSASVEAELKIDFAQIYKESHLCRDTLELVRELSEPLPGSKDLHFSTRFPQNSLGQFMACLWKQHLSYWRSPEYNLTRFIFMIVCAIIFGAVFWQKGKKINNQQDLFNVLGSMYIAVIFLGLNYCSTILPYVATERAVLYREKFAGMYSSTAYSFAQVVIEIPYILVQSILYVAITYPMIGFHWSVQKVFWYFYTTFCTFLYFVYLGMMVMSMSSNLDIASVLSTAVYTIFNLFSGFLMPGPKIPKWWIWCYWICPTAWSLNGLLTSQYGDIEKEVLVFGERKSVGSFLRDYYGFRHDRLSLVAVVLIVYPIVYASLFAYFIKKMNYQKR* 1438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1980 1437 Pfam ABC-2 type transporter 511 722 IPR013525 GO:0016020|GO:0140359
Gso7g1980 1437 Pfam ABC-2 type transporter 1163 1375 IPR013525 GO:0016020|GO:0140359
Gso7g1980 1437 Gene3D - 851 1083 IPR027417 -
Gso7g1980 1437 Gene3D - 160 425 IPR027417 -
Gso7g1980 1437 Pfam ABC transporter 867 1017 IPR003439 GO:0005524
Gso7g1980 1437 Pfam ABC transporter 175 357 IPR003439 GO:0005524
Gso7g1980 1437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 432 IPR027417 -
Gso7g1980 1437 CDD ABCG_PDR_domain1 171 414 IPR034001 -
Gso7g1980 1437 Pfam ABC-transporter N-terminal 94 150 IPR029481 -
Gso7g1980 1437 CDD ABCG_PDR_domain2 834 1072 IPR034003 -
Gso7g1980 1437 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 2 1437 - -
Gso7g1980 1437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 862 1072 IPR027417 -
Gso7g1980 1437 Pfam Plant PDR ABC transporter associated 727 789 IPR013581 -
Gso7g1980 1437 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 837 1090 IPR003439 GO:0005524
Gso7g1980 1437 SMART AAA_5 184 409 IPR003593 -
Gso7g1980 1437 SMART AAA_5 874 1066 IPR003593 -
Gso7g1980 1437 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 160 432 IPR003439 GO:0005524
Gso7g1980 1437 Pfam ABC-2 type transporter 1046 1113 IPR043926 GO:0140359
Gso7g1980 1437 Pfam ABC-2 type transporter 390 467 IPR043926 GO:0140359
Gso7g1980 1437 PANTHER ATP-BINDING CASSETTE TRANSPORTER 2 1437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1980 Gso-Chr7 43768041 43777415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1980 862 1049 Calmodulin-binding Proteins AT2G36910 27.136 4.95e-06 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1980 K08711 - gmx:100779615 2788.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1980 7 43768041 43777415 Gso17g0324 17 2914551 2923827 GST