Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1978 ATGGGTTGCTTTGGCTTCTGCAAAGGAGATGATAGTGTCACAGTTGCTGACAGAGGACCTTTCATGCAAAGCACTCCTACTGGGAACCCCAGTTATCATGGAAGACACGCAGCAGTAACTGCTCCTCGGACTATAAATGTTCAACCTATTGGTGTCCCTTCAATTACAGTAGATGAGTTGAAGCCTTTGACAGATAATTTTGGCTCAAAATGTTTCATTGGTGAGGGTGCATATGGGAAAGTATATCAAGCCACATTGAAAAATGGGCGTGCAGTGGTAATCAAAAAGTTAGATTCCAGTAATCAGCCAGAGCAGGAATTTCTTTCTCAGGTCTCCATCGTATCAAGGCTAAAGCATGAAAACGTTGTTGAGCTTGTTAACTATTGTGTTGATGGTCCTTTCCGTGCCCTTGCCTATGAGTATGCTCCTAAAGGATCCCTTCATGATATTCTACATGGACGCAAAGGTGTCAAGGGTGCACAACCTGGTCCAGTTCTCTCATGGGCTCAGAGAGTTAAAATTGCTGTTGGAGCAGCCAGGGGACTTGAATATCTTCATGAAAAGGCAGAGATTCATATCATCCATCGTTACATTAAGTCTAGTAACATACTTCTTTTTGATGATGACGTTGCGAAGATTGCTGATTTTGATTTGTCAAATCAAGCCCCTGATGCAGCAGCACGTCTTCATTCTACCCGTGTTCTTGGGACCTTTGGTTACCATGCTCCAGAATATGCAATGACTGGACAACTCACTTCAAAAAGTGATGTTTATAGCTTTGGAGTTATATTACTGGAACTCTTAACCGGACGTAAACCGGTTGATCATACACTACCCAGAGGACAGCAAAGCCTTGTGACTTGGGCAACACCAAAGCTTAGTGAAGATAAGGTGAAGCAGTGTGTTGATGTTAGACTAAAGGGAGAGTACCCTTCAAAGTCAGTTGCAAAGATGGCTGCTGTTGCTGCATTGTGTGTGCAATATGAAGCTGAGTTTCGGCCAAATATGAGCATTATAGTGAAAGCTCTACAGCCTCTACTGAATACTCGATCTTCTCACTCAAAGGAATCATCCAACATGTAA 1083 0.4294 MGCFGFCKGDDSVTVADRGPFMQSTPTGNPSYHGRHAAVTAPRTINVQPIGVPSITVDELKPLTDNFGSKCFIGEGAYGKVYQATLKNGRAVVIKKLDSSNQPEQEFLSQVSIVSRLKHENVVELVNYCVDGPFRALAYEYAPKGSLHDILHGRKGVKGAQPGPVLSWAQRVKIAVGAARGLEYLHEKAEIHIIHRYIKSSNILLFDDDVAKIADFDLSNQAPDAAARLHSTRVLGTFGYHAPEYAMTGQLTSKSDVYSFGVILLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKVKQCVDVRLKGEYPSKSVAKMAAVAALCVQYEAEFRPNMSIIVKALQPLLNTRSSHSKESSNM* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1978 360 Gene3D Phosphorylase Kinase; domain 1 34 141 - -
Gso7g1978 360 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 356 - -
Gso7g1978 360 CDD STKc_IRAK 73 346 - -
Gso7g1978 360 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Gso7g1978 360 PIRSF ILK 32 358 - -
Gso7g1978 360 ProSiteProfiles Protein kinase domain profile. 67 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso7g1978 360 Pfam Protein tyrosine and serine/threonine kinase 73 343 IPR001245 GO:0004672|GO:0006468
Gso7g1978 360 Gene3D Transferase(Phosphotransferase) domain 1 143 360 - -
Gso7g1978 360 SUPERFAMILY Protein kinase-like (PK-like) 45 343 IPR011009 -
Gso7g1978 360 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1978 Gso-Chr7 43738787 43743677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1978 36 349 Receptor kinase-like Gene Family AT4G02010 45.833 2.26e-87 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Gso7g1978 PK_Tyr_Ser-Thr 5.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1978 K13436 - gmx:547595 713.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g1978 7 43738787 43743677 Gso17g0327 17 2958711 2963346 GST