Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1970 ATGGCTCACAGGCGTTGCCTCTTGATAAGAGGGAACCTCATGAATCGGAAGTGCCACCCATCTTTCAGTTATGTTCTCCATAGCAATGAAGGGAAACGTGAATGCCCTGATGAAAAGTCATCTTCAGCTGGCATTAGTAATTCTATCCAAAGAAGGATGTTTGGGAACTCAGTTGATGGATCAATGCGGTTTGTTTCCTATTCTGGTCAAAGAATGCATTCAAACAGATTCCTTTCTCCGTACTCTGGATATAATTTCTGTCGACATATGTCAACAGTCAATCAGGGTTCTGATAAGATTGACATAATGACTGACATAGCAGATGTTCTCAAAGACACAACTGTGGAAGCTGTAACTTCTCAGGCTCCCATCGTTAAAGAAGTTGCAATTGCTGCTGCTGACTCCGCTTTACCTGTGAAGGCCTTGCAGTACATTATAGATGCTGTGCATTCCTACACTGGATTAAACTGGTGGGCATCCATAGTTCTAACAACTCTCTTGATTCGGAGTGCAACAGTTCCACTCTTAATAAATCAACTTAAGGCCACTTCTAAGCTTACAATAATGAGGCCGCACATGGAAAAAATAAAGCAAGAGATAGAGGATAAGGCTATGGATCCTGTAGCTGTTGCTGAAGGTCAGAAAAGGATGAAGAAGCTATTTAAGGAATATGGTGCGAGTCCATTTACTCCATTGAAGGGACTCTTTATTCAAGGTCCTGTCTTTATTAGTTTTTTCCTTGCGATAAGGAATATGGCTGAGAAGATGCCATCATTCAAGCATGGGGGAGCCTACTGGTTTGTTGATCTCACAACTCCAGATTCCTTGTACATTTTGCCAGTTTTGACTGCTTTGTCATTCTTAATAACAGTAGAGTGCAATATGCAAGAAGGCTTGGAAGGAAATCCAGTTGCTGGCACCATGAAAAAGTTCTCTAGGGGTCTTGCAGTCCTTACAGTTCCTTTCACCATGGGATTTCCAAAGGCTATATTTTGTTACTGGATTACATCAAATTTGTTTTCACTTGTGTATGGACTTGTCCTTAAATTTCCTGGTGTAAAGAAAGCTCTGCGGATTCCCATAATACCCCAAGCAGCACCCACCAGTGGTCCACAATCTCCCTTTTCTATATTTCCAGCACTAAAACAAGCTACGTCAGCAACAAATGGACCAAACTCAATGCCTGTTGAACCATCAAAACATCCAAAGAAAAAAACATCTTCTTCTGATGTCAATCAAAGACTTAGACGTTTAGAGAAACAAGTGAAAGGAAGAAAGAAAAACAAGAACTGA 1293 0.4099 MAHRRCLLIRGNLMNRKCHPSFSYVLHSNEGKRECPDEKSSSAGISNSIQRRMFGNSVDGSMRFVSYSGQRMHSNRFLSPYSGYNFCRHMSTVNQGSDKIDIMTDIADVLKDTTVEAVTSQAPIVKEVAIAAADSALPVKALQYIIDAVHSYTGLNWWASIVLTTLLIRSATVPLLINQLKATSKLTIMRPHMEKIKQEIEDKAMDPVAVAEGQKRMKKLFKEYGASPFTPLKGLFIQGPVFISFFLAIRNMAEKMPSFKHGGAYWFVDLTTPDSLYILPVLTALSFLITVECNMQEGLEGNPVAGTMKKFSRGLAVLTVPFTMGFPKAIFCYWITSNLFSLVYGLVLKFPGVKKALRIPIIPQAAPTSGPQSPFSIFPALKQATSATNGPNSMPVEPSKHPKKKTSSSDVNQRLRRLEKQVKGRKKNKN* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1970 430 TIGRFAM yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 156 346 IPR028055 -
Gso7g1970 430 MobiDBLite consensus disorder prediction 385 430 - -
Gso7g1970 430 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEIN OXA1L 75 407 - -
Gso7g1970 430 MobiDBLite consensus disorder prediction 398 418 - -
Gso7g1970 430 PANTHER OXA1 75 407 IPR001708 GO:0016021|GO:0032977
Gso7g1970 430 Pfam 60Kd inner membrane protein 157 346 IPR001708 GO:0016021|GO:0032977
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1970 Gso-Chr7 43645397 43668013 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1970 137 429 Chloroplast and Mitochondria Gene Families AT2G28800 22.150 2.17e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1970 K03217 - gmx:100787806 852.047