Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1955 ATGGCAGCATGCCTGAAGCCACCTAGACTATCCAGCACAGAAGATGACTCTTTGATACTCTTTTCAACTTCTAATTCTCCTGAAGAGTCCAATAGTCCTTCTTCCTCTTTCTACCATTCACCACCAACATCACTTCATCAATTCAGAACTGCAAACAAACTTTCTGTGAGAAATCTCTCCTACACTTTGCTTCCTCACAAGACCACTCCCTTATCATTTTTCCACCTGACTCAAAACCCAAAGCCTGTAAACATACTCAAGTCAGTCTCTTTTGTTGCCAGAAGTTCTGAGGTTGTTGCTGTTGTTGGTCCTAGTGGCACAGGAAAGTCTACCCTTCTGCGAATCATTTCCGGAAGGGTAAAAGATGAAGATTTTGATCCTAAAAGTGTCTCAATCAATGATCAGCCTATGACTAGTCCAGCTCAGTTGAGGAAGACATGTGGCTTTGTGGCACAAGTGGACAATTTGCTTCCCATGCTAACAGTCAAAGAAACTTTGATGTATAGTGCAAAGTTTAGGCTAAAAGAAATGACACCAAAGGATAGAGAGAGGAGGGTAGAAAGCTTGTTGCAAGAGCTAGGCCTTTTTCATGTTGCAAATAGTTTTGTTGGGGATGAAGAGAATAGAGGGATATCCGGTGGAGAGAGGAAAAGGGTGTCTATTGGAGTTGATATGATTCACAATCCTCCAATTTTGCTCCTAGATGAGCCAACATCAGGTCTAGACAGTACTTCAGCTTTGCAAGTCATAGAGCTTCTGTCATCAATTGCTAAAGCAAAGCAAAGGACAGTGGTTCTTTCAATCCACCAACCCAGCTATAGAATATTGCAGTATATTTCCAAGTTCTTGATCCTCTCTCATGGTTCAGTTGTTCATAATGGTAGCCTAGAACAGCTAGAGGAAACCATAAGTAAACTGGGATTTCAAATTCCAACACAACTGAATGCTTTAGAGTTCTCCATGGAAATTATACGTGGGTTGGAAGGTTCTGATTCCAAATATGACACTTGCACCATTGAGGAAAAGGAGCCATTTCCAAACCTCATGTGGCCAGAGGAAGAAAACTGTGGAGTCCAAATTCTCCGATCACAATGTAACAAGGAAAGTTATGGCAGTCTTTGTTATGCAAACTTGATTGAGATATTGTTTCTCTGCTCAAGATTTTGGAAGATCATCTATAGAACAAAGCAGCTTTTCCTGGCCAGAACAATGCAAGCACTAGTTGGTGGCTTTGGGCTAGGAAGTGTTTACATAAAGATAAGAAGGGATGAAGGAGGAGCTGCTGAAAGGTTAGGTCTATTTGCATTTAGTCTTAGTTTTCTCCTCTCTTCTACAGTTGAAGCACTTCCAATATACCTTCAAGAGAGGATTGTTCTGATGAAAGAAGCCTCAAGGGGAGCCTATAGGATTTCCTCTTACATGATAGCCAACACATTTGTCTTCCTTCTATTCTTGTTTGTGGTATCTATACTTTTTGCTGTTCCTGTGTATTGGCTTGTAGGACTAAACCCTTCCCTTTCTGCCTTCACCTTCTTCACTTTAGTGGTTTGGCTCATTGTGCTCATGGCAAGTTCTTTGGTACTCTTCTTAAGTGCAGTATCTCCTGATTTCATTTCAGGTAACTCCCTCATCTGCACAGTTCTTGGAGCCTTCTTCCTCTTCTCTGGATACTTCATACCAAAGGAGAGCATCCCAAAGTATTGGCTTTTCATGTACTATGTGTCTCTCTATAGGTACCCTTTGGATGCACTCCTCACAAATGAGTATTGGAATGTTAGAAATGAGTGTTTCTCACATCAAATAGAGGGATCACAGTGTCTGATCACTGGATTTGATGTGTTGAAGAGTAGAGGACTCGAAAGGGATAACAGGTGGATGAATGTGGGAATAATGTTGGGATTCTTTGTGTTTTATCGTGTGCTTTGTTGGATAATACTTGCACGAAAGGTCTCCAAGACAACAATATAG 1968 0.4121 MAACLKPPRLSSTEDDSLILFSTSNSPEESNSPSSSFYHSPPTSLHQFRTANKLSVRNLSYTLLPHKTTPLSFFHLTQNPKPVNILKSVSFVARSSEVVAVVGPSGTGKSTLLRIISGRVKDEDFDPKSVSINDQPMTSPAQLRKTCGFVAQVDNLLPMLTVKETLMYSAKFRLKEMTPKDRERRVESLLQELGLFHVANSFVGDEENRGISGGERKRVSIGVDMIHNPPILLLDEPTSGLDSTSALQVIELLSSIAKAKQRTVVLSIHQPSYRILQYISKFLILSHGSVVHNGSLEQLEETISKLGFQIPTQLNALEFSMEIIRGLEGSDSKYDTCTIEEKEPFPNLMWPEEENCGVQILRSQCNKESYGSLCYANLIEILFLCSRFWKIIYRTKQLFLARTMQALVGGFGLGSVYIKIRRDEGGAAERLGLFAFSLSFLLSSTVEALPIYLQERIVLMKEASRGAYRISSYMIANTFVFLLFLFVVSILFAVPVYWLVGLNPSLSAFTFFTLVVWLIVLMASSLVLFLSAVSPDFISGNSLICTVLGAFFLFSGYFIPKESIPKYWLFMYYVSLYRYPLDALLTNEYWNVRNECFSHQIEGSQCLITGFDVLKSRGLERDNRWMNVGIMLGFFVFYRVLCWIILARKVSKTTI* 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1955 655 Pfam ABC transporter 86 239 IPR003439 GO:0005524
Gso7g1955 655 MobiDBLite consensus disorder prediction 22 43 - -
Gso7g1955 655 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 3 648 - -
Gso7g1955 655 PANTHER ABC TRANSPORTER G FAMILY MEMBER 23 3 648 - -
Gso7g1955 655 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 71 312 IPR003439 GO:0005524
Gso7g1955 655 Pfam ABC-2 type transporter 381 589 IPR013525 GO:0016020|GO:0140359
Gso7g1955 655 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 305 IPR027417 -
Gso7g1955 655 SMART AAA_5 95 297 IPR003593 -
Gso7g1955 655 Gene3D - 70 326 IPR027417 -
Gso7g1955 655 Pfam ABC-2 type transporter 269 333 IPR043926 GO:0140359
Gso7g1955 655 ProSitePatterns ABC transporters family signature. 211 225 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1955 Gso-Chr7 43404219 43406482 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1955 83 299 Calmodulin-binding Proteins AT2G36910 28.700 4.97e-12 67.4