Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1923 ATGAGAAGAGAAAATGGGGAACATGTATTTTTAATTTTTCTTTCCACCCGTATCAGAGGGGTGGACTTTTTGCTGAAATCGAGAGTTGAGATCCACGAAACCCAAAAATCAAACCAACTAACCAACCAGAATCATCGTATAACAACAAAAAGGTTTGATACTTTTTCATTAGAGTTTCAGTTTAGTTTCCAGACAAGAAAGGCACAGAGAAAAGAGAGAGAAACGAAAAACAAAAAGAAGAAAAAGTTGAAGTCTTTGGTTCATTCGAAGTGGATGGTTGGCGGTAGAAATGGAGAGGGAGCAGGAGAGCAAGCACCGCCACCCTCGACGGCGGCGCGTCACGGAACCACTCTCCGGCCACGCGTCTCCACGGAGAGCGTTTTCAGCTGCAGGTATGGTGGCCTCGGTCCCATGACTCTGCTTTCGAGCTTCTTCGGCGACGGCGATGAGTGCAAGTCGTTCTCGGAGCTCCTCGGCGGCGCCATGGTGGACCCCACCGCACCCTCGCCCATGCCCACCACCCCGTTCACCCTTCCACATGGGTTCATCGATTCACCTTCTCCTCAAGGTCAATTTGGAATGACACACCAGCAGATGCTAGCACAGATCACATCTCAGGCTGTGCCAGCCCACTTCAATGTGCAAATTCACTCTGAACATCCATTCTCTATATCAGCAGTGTCTGCTACCTCTTTGACACAGTTTCCTACAGGATCCAGTACTAGGGTGAAAGAATCCCTTCATTATTCTCACTCTGAACAAAAATTGCAGTCTTCTTCTGTGAATGCTGATAAGCCTAATGATGATGGCTACAATTGGAGGAAGTATGGGCAAAAACATGTGAAAGGTAGAGACTTCTCAAGAAGTTATTACAAATGCACACATCCAAATTGTCCTGTCAAGAAAAAACTTGAGCGTTCTCTTGAAGGTCATGTGACTGCAATTATCTATAAAGGAGAGCACAATCATCAACGTCCTCATCCCAATAAGATCACGAAAGAAACACAGACTTCGAATATAAATTCAGTGTCTAAGATGGATCTAGAATCTAGTCAGGCAACAGGTGAACATGGGTCAGGAACAAGTGATAGTGAGGAAGTAGGTGATCATGAAAGTGAAGATGAGAAAAATGATGAACCTGATGCCAAGAGAAGAAACACAGAAGTCAGGCTCCAGGATCCAGCCTCTTTACATAGAACTGTAGCAGAGACTAGAATCATTGTGCAAACAACAAGTGAAGTGGATCTCTTAGATGATGGATATCGATGGCGCAAATATGGGCAGAAAGTTGTCAAAGGCAACCCATATCCAAGGAGCTATTACAAATGTGCAACCCAAGGTTGCAATGTTCGGAAGCATGTTGAGAGGGCTTCAATGGATCCTAAAGCTGTCCTAACAACATACGAAGGAAAACACAATCATGATGTGCCGGTAGCTAAGACTAATAGCCACACACTTGCCAACAATAGTGCATCACAGCTAAAAGCACAAAATATTGCCATACCCGACGACAAGCATAGTTTCAGCAGTAGGGGTGTTCGGGGGAATGAACAGCGACCTTTGGGAAGTCTAAGATTGAAGGAAGAGCAGATAACATAG 1599 0.4503 MRRENGEHVFLIFLSTRIRGVDFLLKSRVEIHETQKSNQLTNQNHRITTKRFDTFSLEFQFSFQTRKAQRKERETKNKKKKKLKSLVHSKWMVGGRNGEGAGEQAPPPSTAARHGTTLRPRVSTESVFSCRYGGLGPMTLLSSFFGDGDECKSFSELLGGAMVDPTAPSPMPTTPFTLPHGFIDSPSPQGQFGMTHQQMLAQITSQAVPAHFNVQIHSEHPFSISAVSATSLTQFPTGSSTRVKESLHYSHSEQKLQSSSVNADKPNDDGYNWRKYGQKHVKGRDFSRSYYKCTHPNCPVKKKLERSLEGHVTAIIYKGEHNHQRPHPNKITKETQTSNINSVSKMDLESSQATGEHGSGTSDSEEVGDHESEDEKNDEPDAKRRNTEVRLQDPASLHRTVAETRIIVQTTSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCATQGCNVRKHVERASMDPKAVLTTYEGKHNHDVPVAKTNSHTLANNSASQLKAQNIAIPDDKHSFSSRGVRGNEQRPLGSLRLKEEQIT* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1923 532 ProSiteProfiles WRKY domain profile. 412 477 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso7g1923 532 SUPERFAMILY WRKY DNA-binding domain 409 477 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso7g1923 532 MobiDBLite consensus disorder prediction 503 532 - -
Gso7g1923 532 MobiDBLite consensus disorder prediction 93 120 - -
Gso7g1923 532 MobiDBLite consensus disorder prediction 250 276 - -
Gso7g1923 532 ProSiteProfiles WRKY domain profile. 262 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso7g1923 532 Pfam WRKY DNA -binding domain 268 324 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso7g1923 532 Pfam WRKY DNA -binding domain 418 474 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso7g1923 532 MobiDBLite consensus disorder prediction 376 392 - -
Gso7g1923 532 PANTHER WRKY TRANSCRIPTION FACTOR 58-RELATED 110 531 - -
Gso7g1923 532 MobiDBLite consensus disorder prediction 317 396 - -
Gso7g1923 532 MobiDBLite consensus disorder prediction 252 266 - -
Gso7g1923 532 Coils Coil 66 86 - -
Gso7g1923 532 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 110 531 IPR044810 GO:0003700
Gso7g1923 532 SUPERFAMILY WRKY DNA-binding domain 265 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso7g1923 532 MobiDBLite consensus disorder prediction 331 361 - -
Gso7g1923 532 Gene3D WRKY domain 252 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso7g1923 532 Gene3D WRKY domain 402 478 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso7g1923 532 SMART WRKY_cls 267 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso7g1923 532 SMART WRKY_cls 417 476 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1923 Gso-Chr7 42646861 42650741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1923 111 532 WRKY Transcription Factor Family AT2G03340 48.444 2.00e-132 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso7g1923 WRKY 5.8e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1923 - - gmx:100802109 1055.05