Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1902 ATGAAGCTGCTCATTGCTCTGCTTCTGGTGTTGTGCGCGCCGTTTTCATCTTCTTCCAAACCCAAAGACCCGTTCCTCGGAATCTCCCCCGAAGATGACAAGTATTACAAGGCTTCCGATGTAATAAGGTGTAAAGATGGATCCGGAAAATTCACCAAGGCGCAGCTCAACGACGATTTCTGTGATTGCGCTGATGGCACCGATGAACCTGGCACATCGGCATGTCCGGGTGGAAAATTTTATTGTCGGAATGCAGGACATTCTCCTGTTTACTTGTTTTCATCTAGAGTGAACGATGGAATTTGTGATTGCTGTGATGGAACTGATGAATATGATGGTCAAGTAAAGTGTCCAAATACCTGCTGGGAGGCTGGTAAAGTTGCTCGAGATAGACTGGAAAAAAAGATTGCCACTTATCAAGAGGGCGTCAAATTGCGAAAGCTAGAAATGGAACAAGCTAAAGTAGCTATGGAGAAGGATGAGGCAGAACTTTCAAAACTGAAAAAGGAAGAAAGTATACTTAAAGGGATTGTGAAACAGCTAAAGGATCATAAGGAACAAATAGAGAAGGCAGAGGAGAAGGAGCGTTTACAGAAAGAAAAAGAAGAGAAGCAGAAAAAGGAGTCTGAGGAGAAAGCTAATGAAGCAAAAGATAAAGCTGATGAAGATACAGGGCATAGAAATGAAGCTGAAAAGCATTCAGATGTTGAAGACAATTCTGTAGAAAATAACCATGATAAAATAGAAAATCTAGAGGGTTCTCCTGCCGATCAGGATGAAGCAGGGGACAAATTAGAAGATGTACTTGATAACGATGATGAAGCCAGTGATAGTCCTGGGAGTGAAGGATCTTTGCATAATAAAGTGGAAGAGAATGCAAAAGAAGCTGAGGAAGAACCTATTGTGAAATCTGAAACTGATATAAAGGTCGGAAACAAAGAGTCTTCTGCTGAAATCATCAATAAGGGGAATGATGCATCTGAAAATACCGAGGGATTATCAAGGGAAGAGTTGGGCCGGCTTGTTGCTTCACGCTGGACAGGAGAAAATACTGATAAGTCAAGTGCTGAACCTGATACGACATTAGACAATGAAGATCACGAAGATCTTCCAAAGGGGACAAATAATGAGGAATATGAAGGCTATGCTTCTGAAACTGATGATGACATTGACAGCAACAAATATGATGATGACAGTCACAAATATGACGATGAAGATGAAGTTGATGAAGAGTATCGAGAGGATGAGCATGATGACCTTACTTCCTCCTACAAATCTGATTCTGATAATGAACCAGACTTGTCAGATAATCCTTCTTGGTTAGAGAAAATACAGAGAACTGTGCGGAATATTTTTCAGGCTGTTAATTTATTCCAGGCTCCAGTGAACCAGTCAGATGCTGCTCGTGTTCGCAAGGAATATGATGAATCAAGTGCCAAGTTGTCTAAAATACAGTCTAGAATATCAAGTCTGAAGCAAAAGCTAAAACATGATTTTGGTCCAGCAAAGGAGTTTTATTCATTCTATGATCATTGCTTTGAGGGCAAGGAGAACAAGTACACTTACAAAGTCTGCCCCTATAAACAGGCTTCTCAGGAGGAGGGCTATTCCAACACCCGTTTGGGGAGCTGGGACAAATTTGAGGATTCATACAGAGTAATGGTGTTTTCTAATGGTGATAAATGCTGGAATGGTCCTGATAGGAGTTTGAAGGTCAAGCTAAGATGTGGGTTGAAAAACGAGATTACTGATGTAGATGAACCAAGCCGTTGCGAATATGTAGCAGTATTATCTACCCCAGCCCTTTGTCAAGAGGAAAGGCTGAAGGAGTTACAACACAAGCTAGACTTGTTGAATTCGGAAATACCATCAAACCATGATGAGTTGTGA 1890 0.4122 MKLLIALLLVLCAPFSSSSKPKDPFLGISPEDDKYYKASDVIRCKDGSGKFTKAQLNDDFCDCADGTDEPGTSACPGGKFYCRNAGHSPVYLFSSRVNDGICDCCDGTDEYDGQVKCPNTCWEAGKVARDRLEKKIATYQEGVKLRKLEMEQAKVAMEKDEAELSKLKKEESILKGIVKQLKDHKEQIEKAEEKERLQKEKEEKQKKESEEKANEAKDKADEDTGHRNEAEKHSDVEDNSVENNHDKIENLEGSPADQDEAGDKLEDVLDNDDEASDSPGSEGSLHNKVEENAKEAEEEPIVKSETDIKVGNKESSAEIINKGNDASENTEGLSREELGRLVASRWTGENTDKSSAEPDTTLDNEDHEDLPKGTNNEEYEGYASETDDDIDSNKYDDDSHKYDDEDEVDEEYREDEHDDLTSSYKSDSDNEPDLSDNPSWLEKIQRTVRNIFQAVNLFQAPVNQSDAARVRKEYDESSAKLSKIQSRISSLKQKLKHDFGPAKEFYSFYDHCFEGKENKYTYKVCPYKQASQEEGYSNTRLGSWDKFEDSYRVMVFSNGDKCWNGPDRSLKVKLRCGLKNEITDVDEPSRCEYVAVLSTPALCQEERLKELQHKLDLLNSEIPSNHDEL* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1902 629 Pfam Glucosidase II beta subunit-like protein 471 628 IPR036607 -
Gso7g1902 629 Coils Coil 145 219 - -
Gso7g1902 629 MobiDBLite consensus disorder prediction 193 438 - -
Gso7g1902 629 Coils Coil 467 494 - -
Gso7g1902 629 ProSiteProfiles MRH domain profile. 510 605 IPR044865 -
Gso7g1902 629 MobiDBLite consensus disorder prediction 387 401 - -
Gso7g1902 629 PANTHER BNACNNG14010D PROTEIN 3 629 - -
Gso7g1902 629 Coils Coil 601 621 - -
Gso7g1902 629 MobiDBLite consensus disorder prediction 402 416 - -
Gso7g1902 629 SUPERFAMILY Mannose 6-phosphate receptor domain 510 603 IPR009011 -
Gso7g1902 629 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 3 629 IPR039794 -
Gso7g1902 629 MobiDBLite consensus disorder prediction 263 277 - -
Gso7g1902 629 MobiDBLite consensus disorder prediction 193 262 - -
Gso7g1902 629 MobiDBLite consensus disorder prediction 356 375 - -
Gso7g1902 629 MobiDBLite consensus disorder prediction 417 432 - -
Gso7g1902 629 MobiDBLite consensus disorder prediction 287 312 - -
Gso7g1902 629 Gene3D - 505 603 IPR009011 -
Gso7g1902 629 Pfam Glucosidase II beta subunit-like 20 169 IPR028146 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1902 Gso-Chr7 42331748 42343076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1902 16 629 Calmodulin-binding Proteins AT5G56360 59.554 0.0 650