LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso7g1900	ATGTTTGACACAATGCTTCGTATTTTTGCATGCAGATTTTTTATTTCTTTCAGTTTTTCAGGCCATAGTAGCTGTCCACAATGTTTTCTCGCAGATCAAGTGGAAGAGATGCCGGGGATGAACTTGCGGTCAAAACTTCCTTCTAATGAGGTCCCTACTATTCTCATCTATGGGGGCAAGAGCTGGGACATGGTGTATTATGGACAAAGCAAACAGAAGGCTTTTGGTGTCACAGGCTGGAAAAAATTTGTTATTGATAATTGTTTGAGGGTTGGAGATGCTTGCATTTTTGAGCTCATGGAAAGCAGTGACAAGAAAGTCATACTTGAAGTTCAAATTCTTAGAGGTGACATCCCATCTGAATGGCTTGGAAATGAAATGATCATAGGTCAAGGGAATGAAATGATCATAGGTCAAGAGAATGAAATGATCATAGGTCACAGTCGGGAAAATCCAATTGTCCTTAACTAG	471	0.3992	MFDTMLRIFACRFFISFSFSGHSSCPQCFLADQVEEMPGMNLRSKLPSNEVPTILIYGGKSWDMVYYGQSKQKAFGVTGWKKFVIDNCLRVGDACIFELMESSDKKVILEVQILRGDIPSEWLGNEMIIGQGNEMIIGQENEMIIGHSRENPIVLN*	157

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso7g1900	156	PANTHER	B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED	43	125	IPR044837	-
	Gso7g1900	156	PANTHER	B3 DOMAIN-CONTAINING PROTEIN OS04G0386900	43	125	-	-
	Gso7g1900	156	ProSiteProfiles	B3 DNA-binding domain profile.	59	117	IPR003340	GO:0003677
	Gso7g1900	156	Gene3D	-	26	117	IPR015300	-
	Gso7g1900	156	SMART	B3_2	13	117	IPR003340	GO:0003677
	Gso7g1900	156	CDD	B3_DNA	58	115	IPR003340	GO:0003677
	Gso7g1900	156	Pfam	B3 DNA binding domain	58	108	IPR003340	GO:0003677
	Gso7g1900	156	SUPERFAMILY	DNA-binding pseudobarrel domain	49	110	IPR015300	-

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso7g1900	62	117	REM Transcription Factor Family	AT4G33280	45.614	3.11e-08	49.7

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	B3	Gso7g1900		B3	8.6e-12	CL0405

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso7g1900	-		-	gmx:100804948	249.21

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