Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1900 ATGTTTGACACAATGCTTCGTATTTTTGCATGCAGATTTTTTATTTCTTTCAGTTTTTCAGGCCATAGTAGCTGTCCACAATGTTTTCTCGCAGATCAAGTGGAAGAGATGCCGGGGATGAACTTGCGGTCAAAACTTCCTTCTAATGAGGTCCCTACTATTCTCATCTATGGGGGCAAGAGCTGGGACATGGTGTATTATGGACAAAGCAAACAGAAGGCTTTTGGTGTCACAGGCTGGAAAAAATTTGTTATTGATAATTGTTTGAGGGTTGGAGATGCTTGCATTTTTGAGCTCATGGAAAGCAGTGACAAGAAAGTCATACTTGAAGTTCAAATTCTTAGAGGTGACATCCCATCTGAATGGCTTGGAAATGAAATGATCATAGGTCAAGGGAATGAAATGATCATAGGTCAAGAGAATGAAATGATCATAGGTCACAGTCGGGAAAATCCAATTGTCCTTAACTAG 471 0.3992 MFDTMLRIFACRFFISFSFSGHSSCPQCFLADQVEEMPGMNLRSKLPSNEVPTILIYGGKSWDMVYYGQSKQKAFGVTGWKKFVIDNCLRVGDACIFELMESSDKKVILEVQILRGDIPSEWLGNEMIIGQGNEMIIGQENEMIIGHSRENPIVLN* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1900 156 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 43 125 IPR044837 -
Gso7g1900 156 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS04G0386900 43 125 - -
Gso7g1900 156 ProSiteProfiles B3 DNA-binding domain profile. 59 117 IPR003340 GO:0003677
Gso7g1900 156 Gene3D - 26 117 IPR015300 -
Gso7g1900 156 SMART B3_2 13 117 IPR003340 GO:0003677
Gso7g1900 156 CDD B3_DNA 58 115 IPR003340 GO:0003677
Gso7g1900 156 Pfam B3 DNA binding domain 58 108 IPR003340 GO:0003677
Gso7g1900 156 SUPERFAMILY DNA-binding pseudobarrel domain 49 110 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1900 62 117 REM Transcription Factor Family AT4G33280 45.614 3.11e-08 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Gso7g1900 B3 8.6e-12 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1900 - - gmx:100804948 249.21