Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1863 ATGGAGAACATTCTGGGTCTCATCAAACTTCGTATCAAAAGAGGCACTAATCTCAAAGCTTGTGATACTCGTACCAGTGACCCATATGTCTTCGTCACCATGGCCGAACAGAAACTGAAAACTGGTGTTGTGAAAGATAACATTAATCCTGAGTGGAATGAAGAATTGACACTTTATGTAAGCGATGTTAACATTCCCGTACATCTGACAGTTTCAGACAAAGACACTTTCACCGTAGACGACAGCATGGGCGATGCAGAAATAGACCTAAAGCCGTATCTTCAGTGTGTAAAGATGAACTTGAGCGATCTTCCAGATGGCCATGTAATCAAGAGGGTTCAACAAGATAGGACTAACTGTCTTGCTGAAGAGAGCAACTGCATATGGAAGAATGGAAAAGTCATCCAAGAGATGAGTTTAAGATTGAGAAACGTCAAGTCTGGGGAAATAACTGTGGAAATTGAGTGGGTTAATCTTCCAGATTCAAAGGGCTTATCTGAAATTGAGTTTTAG 513 0.4094 MENILGLIKLRIKRGTNLKACDTRTSDPYVFVTMAEQKLKTGVVKDNINPEWNEELTLYVSDVNIPVHLTVSDKDTFTVDDSMGDAEIDLKPYLQCVKMNLSDLPDGHVIKRVQQDRTNCLAEESNCIWKNGKVIQEMSLRLRNVKSGEITVEIEWVNLPDSKGLSEIEF* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1863 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Gso7g1863 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 170 IPR044562 -
Gso7g1863 170 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 170 - -
Gso7g1863 170 SMART C2_3c 7 102 IPR000008 -
Gso7g1863 170 Gene3D C2 domain 4 165 IPR035892 -
Gso7g1863 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 158 IPR035892 -
Gso7g1863 170 Pfam C2 domain 7 92 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1863 Gso-Chr7 41571017 41572776 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1863 38 166 C2H2 Transcription Factor Family AT1G70790 55.725 2.27e-48 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1863 - - gmx:100781585 341.658