Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1857 ATGGCGAAGCGCTTGATTCCCTGCTTCAATCGCATTCTCGTTGAGAAAATCGTCCCTCCCTCCAAGACAAGCGCCGGCATTCTCCTCCCTGAGAAGTCCTCCCAGCTTAATTCCGGTAAGGTGATAGCGGTTGGGCCTGGATCACGTGACCAGGCAGGGAACTTGATTCCGGTGTCCGTGAAGGAAGGTGATCACGTGCTCTTGCCGGAGTACGGTGGCACGCAGATCAAGCTCGATGACAAAGAGTTCCATTTGTTTAGGGATGAGGACATCTTGGGTATTCTGCATGATTGA 294 0.5272 MAKRLIPCFNRILVEKIVPPSKTSAGILLPEKSSQLNSGKVIAVGPGSRDQAGNLIPVSVKEGDHVLLPEYGGTQIKLDDKEFHLFRDEDILGILHD* 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1857 97 Gene3D GroES chaperonin 1 97 IPR037124 GO:0006457
Gso7g1857 97 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gso7g1857 97 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gso7g1857 97 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gso7g1857 97 PRINTS 10kDa chaperonin signature 82 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gso7g1857 97 CDD cpn10 4 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gso7g1857 97 SMART Cpn10_2 4 95 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gso7g1857 97 Pfam Chaperonin 10 Kd subunit 6 94 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gso7g1857 97 PANTHER GROES-LIKE FAMILY PROTEIN 1 97 - -
Gso7g1857 97 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 97 IPR020818 GO:0005524|GO:0006457|GO:0140662
Gso7g1857 97 SUPERFAMILY GroES-like 3 96 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1857 Gso-Chr7 41419703 41420526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1857 3 96 Calmodulin-binding Proteins AT5G20720 36.458 3.26e-12 58.5