Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1856 ATGGAGCCTAATAATGCATGTACTATGCATTCTCATTGCATAGAGATGTCCATGGAAGTGCACCAAGTTGTTCCACCACCCCACAAGAGCACCCTTCAGAAGCTCCAGGGTAGACTCAAGGAAACTTTCTTCCCTGATGATCCTCTGCGCCAATTCAAGGGACAACCTCTTAAGAGAAAACTGATCCTTGGAGCACAATATGTGTTCCCTATTCTTCAATGGGGTCCTAAGTACAACCTCAAACTCTTCAAATCTGACCTTGTTTCTGGCCTCACTATTGCTAGCTTGGCCATCCCACAGGGAATAAGTTATGCCAAGCTTGCAAGTCTTCCTCCAATTGTGGGACTTTATTCTAGTTTTGTTCCACCACTAGTTTATGCTGTTCTTGGAAGCTCAAAGGACCTTGCAGTTGGACCTGTTTCTATTGCTTCTCTTGTGATGGGATCCATGCTGAGGCAGGAAGTGTCTCCCACAGCAGACCCTATCCTGTTTCTTCAGCTAGCTTTCACTTCAACATTATTTGCTGGCCTCTTTCAAGCTTCTCTTGGAATCCTAAGGCTAGGCTTCATAATTGATTTTCTATCTAAGGCCATTCTTATTGGGTTCATGGCTGGTGCTGCTATTATTGTGTCACTGCAACAGCTCAAGAGCCTGCTTGGAATCACACATTTCACTAATCAAATGGGTCTGATTCCTGTTATGACTTCTGTTTTCCACAATATACATGAGAGCATAAAGAAACCAAAGCTATTCTGGGTCTCAGCTGGAGCTCCTCTTATGTCTGTCATCATCTCTACCCTCTTGGTTTTTGCAATTAAAGCTCAAAATCATGGCATCAGTGCGATTGGAAAATTGCAACAAGGAATAAATCCTCCATCATGGAATATGTTGCTCTTTCATGGAAGTCACCTAGGCCTAGTTATGAAAACAGGGCTTATCACCGGGATTTTGTCCCTCACTGAAGGTATTGCAGTAGGAAGGACATTTGCAGCTCTCAAAAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATTGGGTTTATGAATGTGGTTGGCTCCTTCACTTCCTGCTATGTTACAACAGGTGCTTTCTCTCGATCAGCTGTTAACAATAACGCAGGAGCAAAAACAGCTGTGTCGAATGTAGTGATGTCTGTGACAGTCATGGTAACACTCCTTTTTCTCATGCCATTGTTTCAATACACACCTAATGTCGTGTTGGGCGCAATCATAGTCACAGCAGTAATTGGCCTCATTGATCTCCCTGCTGCTTGTAACATTTGGAAGATAGACAAATTCGATTTCGTTGTGATGCTGACTGCTTTCTTAGGTGTTCTTTTCATCTCTGTCCAGGGAGGCCTTGCTCTTGCTGTCGGGTTATCAACTTTCAAGATACTCTTGCAAATTACGAGGCCGAAAACAGTAATGTTGGGGAAGATTCCAGGAACAGACATATATAGAAATCTTGATCAATACAAGGAAGCTGTGAGAATACCTGGATTTCTTATTTTAAGCATTGAGGCTCCCATCAATTTTGCTAACATCACATATCTCAACGAGAGAACGTTGCGATGGATTGAAGAAGAAGAAGAAGACAACATAAAGGAACAATTAAGCCTTCGATTCTTAGTATTGGAAATGTCAGCTGTGAGTGCTGTTGACACAAGTGGAATCTCACTTTTCAAGGAGTTGAAAGCAACACTGGAAAAGAAGGGTGTTGAGCTTGTGTTGGTCAATCCTCTTGCTGAGGTCATAGAAAAGCTTAAAAAAGCAGATGAAGCTAATGATTTCATACGAGCAGATAACCTTTTCTTAACAGTTGGAGAGGCTGTAGCTTCACTTTCATCAGCAATGAAAGGCCAATCATCAACCATTACAGAAGGGACACACACAATTGTGTCACATAATTGA 1914 0.4216 MEPNNACTMHSHCIEMSMEVHQVVPPPHKSTLQKLQGRLKETFFPDDPLRQFKGQPLKRKLILGAQYVFPILQWGPKYNLKLFKSDLVSGLTIASLAIPQGISYAKLASLPPIVGLYSSFVPPLVYAVLGSSKDLAVGPVSIASLVMGSMLRQEVSPTADPILFLQLAFTSTLFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAIIVSLQQLKSLLGITHFTNQMGLIPVMTSVFHNIHESIKKPKLFWVSAGAPLMSVIISTLLVFAIKAQNHGISAIGKLQQGINPPSWNMLLFHGSHLGLVMKTGLITGILSLTEGIAVGRTFAALKNYKVDGNKEMMAIGFMNVVGSFTSCYVTTGAFSRSAVNNNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDLPAACNIWKIDKFDFVVMLTAFLGVLFISVQGGLALAVGLSTFKILLQITRPKTVMLGKIPGTDIYRNLDQYKEAVRIPGFLILSIEAPINFANITYLNERTLRWIEEEEEDNIKEQLSLRFLVLEMSAVSAVDTSGISLFKELKATLEKKGVELVLVNPLAEVIEKLKKADEANDFIRADNLFLTVGEAVASLSSAMKGQSSTITEGTHTIVSHN* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1856 637 Coils Coil 582 602 - -
Gso7g1856 637 SUPERFAMILY SpoIIaa-like 498 615 IPR036513 -
Gso7g1856 637 ProSiteProfiles STAS domain profile. 492 615 IPR002645 -
Gso7g1856 637 Pfam STAS domain 493 611 IPR002645 -
Gso7g1856 637 Gene3D STAS domain 472 617 IPR036513 -
Gso7g1856 637 CDD STAS_SulP_like_sulfate_transporter 493 608 - -
Gso7g1856 637 Pfam Sulfate permease family 83 243 IPR011547 GO:0016021
Gso7g1856 637 Pfam Sulfate permease family 247 441 IPR011547 GO:0016021
Gso7g1856 637 PANTHER BNAA09G30120D PROTEIN 19 242 IPR030313 -
Gso7g1856 637 PANTHER BNAA09G30120D PROTEIN 242 622 IPR030313 -
Gso7g1856 637 ProSitePatterns SLC26A transporters signature. 112 133 IPR018045 GO:0008271|GO:0008272
Gso7g1856 637 PANTHER SULFATE TRANSPORTER 19 242 IPR001902 GO:0015301|GO:0016020|GO:0055085
Gso7g1856 637 PANTHER SULFATE TRANSPORTER 242 622 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1856 Gso-Chr7 41386455 41393444 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1856 2 622 Inorganic Solute Cotransporters AT3G15990 63.256 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1856 K17471 - gmx:100787284 1177.16