Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1852 ATGATGGAGTCAACGATCATAAACCAAGTCTTTTTCTTCTTCTGCTTCTTTCTATGCTCTCTCTTAGTCTCAGATTCTTCACCATCTGCTTCAAAACCAACTCCTTCATTCCCCAAAGAAGCCCTCCCCACTAAGCATGGTTACCTTCCTATCAGTCCCACTTCCACTTCTTCCATTTTCTATGCCTTCTATGAAGCACAGAACTCAACTTTACCACTCTCCCAAACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGCTGCTCCTCCATGATTGGAAACTTGTACGAACTCGGACCCTGGCGCATCACCGAATCACTCACCCTTCAACGCAACCTTGGTGCTTGGAATAGAGTCTTTGGCCTTCTTTTTCTTGATAGTCCCATTGGAACTGGCTTCAGTGTGGCCTCAACCACACAAGAAATTCCAACGGATCAAATCGGCGTTGCAAAGCATCTTTTTGCTGCTATAACCAGGTTTGTTCAACTTGACCCTCTTTTCAAGCATCGCCCTGTTTATATTACTGGTGAAAGCTATGCTGGCAAGTATGTGCCTGCTATTGGGTACTACATATTGGAGAAAAATGCAAACTTGAAGATTTCTGAAAGAGTGAATTTGGCTGGTGTGGCTATTGGGGATGGGTTAACCGACCCCGAAACTCAAGTGGTTAGTCATGCTGTGAATGCTTATTATGTTGGATTGATCAATCAGAGGCAAAAGGATGGGTTGGAGAAAGCTCAATTGGAAGCAGTTAGATTAGCCCAGATGGGGAATTGGAGTAAAGCAACTGGTGCCAGAAACAAAGTGTTGAATATGTTGCAAAACATGACAGGGTTAGCTACTTTGTATGACTACACAAGGAAGGCTCCTTATGAGGATGATTTGGTTGAACAATTCTTGAACATTGCAGAGGTGAAGAAGGCCTTGGGGGTGAATGAATCGTTTGTGTATGAGTTATGCAGTGATGTTGTTGGGGATGTATTACATGCTGATGTTATGAAAAGTGTTAAATATATGGTGGAATACTTGTTGGGTAGGAGCAGGGTTTTGTTATATCAAGGTCAACATGATTTGAGGGATGGTGTGGTTCAAACAGAAGTTTGGGTGAAGACAATGAAATGGGAGGGGATTGTAGATTTTCTTAATGCTGAAAGGAAGATATGGAAGGTTAATGGAGAGCTTGCTGGGTATGTTCAGAATTGGAAGTCTCTAACCAATGTTGTGGTTTTGGGGGCTGGCCATCTTTTGCCTACTGATCAGCCTGTTAATTCTCAAGCAATGATAGAAGATTGGGTTTTGGAAAAGGGTTTGTTTAAAAGCGTGTAG 1326 0.4306 MMESTIINQVFFFFCFFLCSLLVSDSSPSASKPTPSFPKEALPTKHGYLPISPTSTSSIFYAFYEAQNSTLPLSQTPLLIWLQGGPGCSSMIGNLYELGPWRITESLTLQRNLGAWNRVFGLLFLDSPIGTGFSVASTTQEIPTDQIGVAKHLFAAITRFVQLDPLFKHRPVYITGESYAGKYVPAIGYYILEKNANLKISERVNLAGVAIGDGLTDPETQVVSHAVNAYYVGLINQRQKDGLEKAQLEAVRLAQMGNWSKATGARNKVLNMLQNMTGLATLYDYTRKAPYEDDLVEQFLNIAEVKKALGVNESFVYELCSDVVGDVLHADVMKSVKYMVEYLLGRSRVLLYQGQHDLRDGVVQTEVWVKTMKWEGIVDFLNAERKIWKVNGELAGYVQNWKSLTNVVVLGAGHLLPTDQPVNSQAMIEDWVLEKGLFKSV* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1852 441 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Gso7g1852 441 Gene3D alpha/beta hydrolase 26 438 IPR029058 -
Gso7g1852 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Gso7g1852 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Gso7g1852 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Gso7g1852 441 PRINTS Carboxypeptidase C serine protease (S10) family signature 404 417 IPR001563 GO:0004185|GO:0006508
Gso7g1852 441 PANTHER CARBOXYPEPTIDASE 24 435 - -
Gso7g1852 441 Pfam Serine carboxypeptidase 42 432 IPR001563 GO:0004185|GO:0006508
Gso7g1852 441 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 24 435 IPR001563 GO:0004185|GO:0006508
Gso7g1852 441 SUPERFAMILY alpha/beta-Hydrolases 44 433 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1852 Gso-Chr7 41303677 41305303 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1852 295 432 Calmodulin-binding Proteins AT2G22960 22.302 8.26e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1852 K09645 - gmx:100777309 844.728