Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso7g1851 ATGGAGTCACCCCACGCATCCCTCTTCATCAAATTCAAGACACCAATCTTTTTCTGCTTCTTCCTAAGCACTCTTTCAGTCTCAGCTTCTTCAAAATCAACCCATCTATTCCCCAAAGAAGCTCTTCCCAACAAGTATGGTTACCTTCCAATCAGCACCACTTCCACTTCTTCCATTTTCTATGCTTTCTATGAAGCCCAGAATTCCACTTTACCTCTCCTCCAGACCCCACTTCTCATTTGGCTCCAAGGTGGCCCTGGTTGCTCCTCAATGCTTGGCAACTTGTATGAACTTGGACCCTGGCGTGTCACCAAATCACTCACCCTACAGTCCAACCCTGGTGCTTGGAATAGAATTTTTGGACTTCTTTTCCTTGATAATCCCATTGGAACTGGCTTCAGTGTGGCCTCAACCCCAGAAGAGATCCCAAAAGATCAAAACACTGTTGCAAAGCACCTTTTTGCTGCTATAACCAGGTTTGTTCAACTTGATCCTGTTTTCAAGCATCGCCCTATTTATATTACTGGTGAAAGCTATGCTGGAAAGTATGTGCCTGCAATAGGGTATTACATATTGAAGAAAAATGCACAGTTGGAAGTTTCTGAAAGAGTGAATTTGGCTGGTGTGGCTATTGGGGATGGGTTAACCGACCCGGAAACTCAAGTGGTTAGTCATGCTCTGAATGCTTATTATGTTGGATTGATCAATCAGAGGCAAAAGAATGGGCTGGAGAAAGCTCAATTGGAAGCAGTTAGATTAGCCCAGATGGGGAATTGGAGTAAAGCAACTGGTGCCAGAAACAAAGTGTTGAATATGTTGCAAAACATGACAGGGTTGGCTACTTTGTATGACTACACAAGGAAGGCTCCTTATGAGGATGATTTGGTTGAACAATTCTTGAACATTGCAGAGGTGAAGAAGGCCTTGGGGGTGAATGAATCGTTTGTGTACGAGTTATGCAGTGATGTTGTTGGGGATGTATTACATGCTGATGTTATGAAGAGTGTTAAATATATGGTGGAATACTTGTTGGGTAGGAGCAGGGTTTTGTTATATCAAGGTCAACATGATTTGAGGGATGGTGTGGTTCAAACAGAGGTTTGGGTGAAGACAATGAAATGGGAAGGGATTGTAGATTTTCTGAATACTGAAAGGAAGATATGGAAGGTTAATGGAGAGCTTGCTGGGTATGTTCAGAATTGGAAGTCTCTAACCAATGTTGTGGTTTTGGGGGCTGGCCATCTTTTGCCTACTGACCAGCCTGTTAATTCTCAAAAAATGATAGAAGATTGGGTTTTGGAAAGGGGTGTGTTTAAAAGTGTGCAGGATGAAAATGTATCCAAAAAGTCTATATGTGTTATGTAA 1365 0.4242 MESPHASLFIKFKTPIFFCFFLSTLSVSASSKSTHLFPKEALPNKYGYLPISTTSTSSIFYAFYEAQNSTLPLLQTPLLIWLQGGPGCSSMLGNLYELGPWRVTKSLTLQSNPGAWNRIFGLLFLDNPIGTGFSVASTPEEIPKDQNTVAKHLFAAITRFVQLDPVFKHRPIYITGESYAGKYVPAIGYYILKKNAQLEVSERVNLAGVAIGDGLTDPETQVVSHALNAYYVGLINQRQKNGLEKAQLEAVRLAQMGNWSKATGARNKVLNMLQNMTGLATLYDYTRKAPYEDDLVEQFLNIAEVKKALGVNESFVYELCSDVVGDVLHADVMKSVKYMVEYLLGRSRVLLYQGQHDLRDGVVQTEVWVKTMKWEGIVDFLNTERKIWKVNGELAGYVQNWKSLTNVVVLGAGHLLPTDQPVNSQKMIEDWVLERGVFKSVQDENVSKKSICVM* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso7g1851 454 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Gso7g1851 454 SUPERFAMILY alpha/beta-Hydrolases 45 432 IPR029058 -
Gso7g1851 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Gso7g1851 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Gso7g1851 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Gso7g1851 454 PRINTS Carboxypeptidase C serine protease (S10) family signature 404 417 IPR001563 GO:0004185|GO:0006508
Gso7g1851 454 Pfam Serine carboxypeptidase 44 432 IPR001563 GO:0004185|GO:0006508
Gso7g1851 454 Gene3D alpha/beta hydrolase 26 446 IPR029058 -
Gso7g1851 454 PANTHER CARBOXYPEPTIDASE 26 440 - -
Gso7g1851 454 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 26 440 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso7g1851 Gso-Chr7 41299437 41301106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso7g1851 295 432 Calmodulin-binding Proteins AT2G22960 22.302 1.42e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso7g1851 K09645 - gmx:100777309 800.816